Styela clava (leathery sea squirt): 120348686
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Entry
120348686 CDS
T07291
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
sclv04145
Phagosome
sclv04814
Motor proteins
sclv04820
Cytoskeleton in muscle cells
sclv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120348686
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120348686
09142 Cell motility
04814 Motor proteins
120348686
04820 Cytoskeleton in muscle cells
120348686
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120348686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120348686
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120348686
03036 Chromosome and associated proteins [BR:
sclv03036
]
120348686
03029 Mitochondrial biogenesis [BR:
sclv03029
]
120348686
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sclv04812
]
120348686
04147 Exosome [BR:
sclv04147
]
120348686
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120348686
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120348686
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120348686
NuA4 complex
120348686
Chromatin remodeling factors
BAF complex
120348686
PBAF complex
120348686
GBAF(ncBAF) complex
120348686
SWR1 complex
120348686
Mitochondrial biogenesis [BR:
sclv03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
120348686
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120348686
Exosome [BR:
sclv04147
]
Exosomal proteins
Proteins found in most exosomes
120348686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
120348686
NCBI-ProteinID:
XP_039274823
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MDDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRQDL
AGRDLTDYMMKILTERGYSFTTTAEREIVRDMKEKLCYIALDFDQELATAATSSSLEKCY
EMPDGQVITIGNERFRCPEAMFQPSLLGMESSGIHETTYNSIMKCDVDIRKDLYSNTVLS
GGSTMFPGIGDRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKP
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatatcgctgctcttgtaattgataatgggtctggaatgtgtaaagcaggg
tttgctggtgacgatgccccaagagctgtgtttccatccattgttggaaggccaagacat
cagggagtgatggttggtatgggccaaaaagatagctacgttggagacgaggctcaaagc
aagcgtgggatattaactttgaagtacccaattgaacatggcatagttagcaactgggat
gacatggaaaagatttggcatcatacattttacaacgaacttcgcgttgctcccgaagaa
cacccagtacttttgacagaggctccgttaaacccgaaggcgaatcgtgagaaaatgacg
caaattatgtttgaaacgttcaacaccccggcaatgtatgttgctatccaagcagtactg
tccctatatgcatctgggcgaacaacagggatcgtactggacagcggagacggcgtatcg
cacactgttccaatctatgaaggatatgctcttccacatgctattttaagacaagattta
gctgggagagatctcaccgattacatgatgaaaattttgactgaaagaggatattctttc
acaacaacagccgaacgcgaaattgttcgtgacatgaaagaaaaactgtgttatattgca
cttgattttgatcaagaattagctacagctgcaaccagtagttctttggaaaaatgttat
gaaatgccagatgggcaggtgattactattggaaacgagcgcttccgttgtccggaggct
atgttccaaccttcacttcttggtatggaatcgtcgggaattcatgaaacaacttacaac
tctatcatgaaatgtgacgtcgatatacgtaaagatctctactcaaatacagttttatct
ggtggatctactatgtttcccggtatcggggatcgaatgcaaaaagaaataacttctctt
gcacctagtacgatgaaaatcaaaattattgctcccccagagcggaaatattccgtatgg
attggcggttcgatactcgcttctctgtcaacgttccaacagatgtggatatcgaagcct
gaatacgatgaatcggggccttccattgtacacagaaaatgcttttaa
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