Schizophyllum commune: SCHCO_02613200
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Entry
SCHCO_02613200 CDS
T01331
Symbol
SCHCODRAFT_02613200
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
scm
Schizophyllum commune
Pathway
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02613200 (SCHCODRAFT_02613200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scm03041
]
SCHCO_02613200 (SCHCODRAFT_02613200)
Spliceosome [BR:
scm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SCHCO_02613200 (SCHCODRAFT_02613200)
Complex C
U5 SnRNP specific factors
SCHCO_02613200 (SCHCODRAFT_02613200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
EFG_C
EFG_IV
EFG_III
GTP_EFTU_D2
MMR_HSR1
EFL1
EF-G_D2
SRPRB
Motif
Other DBs
NCBI-GeneID:
9589060
NCBI-ProteinID:
XP_003038406
UniProt:
D8PMK4
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MSSFDDYDEFGNYIGGDLDSDDEDEVMQEQQQQPTAAAPAPLEGYEHDAMDQDDSGALMQ
VDEPTHNAVVLHEDKQYYPSASDVYGPDVETLVQEEDTQPLTEPIIAPIKVRKWTVEEKD
MPETRFDKAFLLSLTAFPEMVRNVAVVGHLHHGKTALMDMLVFETHKMTWDADKPTRYTD
THVLSRDREISIKSCPMSLVLSTTAGKSHLVHLIDTPGHVNFLDEVAASMRLVDGVVLLV
DVVEGLMVSAENIIRHAIQEGIRITLVVNKVDRLILELRLPPADAYYKIKHTIEEINTFI
SAIDPDPELRLSPENGNVAFASTDMAWCFTLRSFAQMYADTYGKFDVNAFADRLWGDIYF
NKEERKFSKKQSDPDQQRSFVHFVLEPLYKLYNCVLTEEGEELKATLERLGIHLKPVMFK
MDARPLLKVVLDQFFGPSTGLVDVIVEHIPSPVTNARNKVEATYTGPQTSQLAESMKESD
PSGPLMLQVAKLYHTTDAQSFRAFARVLSGTLRKGTQVKVLGEGYSPEDEEDMMKAVVED
IWLSEARYFIPTDEVGPGNLVLLGGVDASISKSATIAPADYEDDLYTFRPIKHMTQSVLK
IAIEPIAPSELPKMLAGLRSVNKSYPLLSTKVEESGEHVIIGTGELYLDSVMHDLRRLFS
EIEIKVSDPVTKFCETVLETSALKCYADTPNKKNRLTMIAEPLERGIAEDIERGRVNMRM
SAKERGKFFEEKYQWDLLASRSIWAFGPDDNGPNILLDDTLPSQVDKKMLGTVKEHIKQG
FQWGAREGPLCDEPMRNVKFRILDASLAPEPIFRGGGQIVPTARRVCYSSFLMAAPRLME
PIYFVEVQAPADCISAVYTVLARRRGHVTQDLPKAGSPLYTVKALIPVIDANGFETDLRT
ATQGQAFCLQIFDHWSIVPGDPTDTSIKLRPLEPASGQALARDLVLKTRRRKGLGDQIAV
SKYLDDEFVLALSASGHADLLG
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttcgacgactatgacgagtttggcaactacatcggcggcgacctcgactcg
gacgacgaggatgaggttatgcaagagcagcagcagcagccaactgcggcggctcccgca
ccgctggagggatacgaacacgacgcgatggaccaagacgacagcggcgcattgatgcag
gttgacgagccaacacacaacgctgtcgtacttcacgaggataagcagtactacccctcc
gcctctgatgtatacggcccggacgtggagacgctagtgcaggaggaagatacgcagcca
ttgaccgaacccatcatcgcccccattaaagtgcgcaaatggacggtcgaggagaaggac
atgccggagacgcggtttgacaaagccttcctcctgagcctgaccgccttccccgagatg
gttcgcaatgtcgcggtggtgggccacctccaccacgggaagaccgcgctcatggacatg
ctcgtgttcgagacacacaaaatgacctgggatgcggacaaaccgaccaggtacaccgac
acccatgttctttcccgggatagagaaatttcgatcaagtcttgccccatgtcgcttgtg
ttgtctacgaccgcggggaagtcgcatttggtgcacttgattgatacacccggtcatgtc
aatttcttggacgaagtcgcggcttctatgcgcctggtggacggtgttgttctgctcgta
gatgtggtggaagggctcatggtctccgccgaaaacatcatacgtcacgccattcaggag
ggcatcagaatcacactcgtcgtcaacaaagtcgacagattaatccttgagctgcgccta
ccacctgcggatgcttactacaagatcaagcacactatagaggagattaacaccttcatc
agtgctatcgacccggaccccgaactgcgtctcagccctgaaaatggcaacgtcgcattc
gcgagcactgacatggcctggtgctttaccttgcgctcgtttgctcagatgtacgccgac
acctatggcaaatttgacgtgaacgctttcgccgaccgcctctggggcgatatctacttc
aacaaggaggaacgcaaattttcgaagaagcagtccgaccccgaccaacaacgctccttc
gtgcacttcgtcctcgagccgctctacaagctgtacaactgcgtgctcacggaggagggc
gaggagttgaaggcgacgcttgagcgcctggggatccacttgaagccggtgatgttcaag
atggacgcgcgcccgttgttgaaggtggtcttggatcagttcttcgggccgtcgacgggg
cttgtggatgtaattgtcgagcatataccgagcccggtgacgaatgcgcggaacaaggtc
gaggctacctacactggtcctcagacctcgcagctcgccgagtcgatgaaggagtccgac
ccctccggccctctcatgcttcaggttgccaagctttaccacacaaccgacgcacagtcc
ttccgtgccttcgcccgcgtcctgtccggcacccttcgcaagggcacgcaggtcaaggtc
ctcggcgagggctactcccccgaggacgaggaggacatgatgaaggcggtcgttgaggac
atctggcttagcgaagcgcgctacttcatccccaccgacgaggtcggccccggcaacctc
gtcctccttggcggcgtcgacgcgtcgatctccaagtccgccacgatcgcgcccgccgac
tacgaggacgacctgtacacgttccgccccatcaagcacatgacgcagagcgtgctgaag
atcgctatcgagcccatcgcgccgagcgagttgccgaagatgctcgcggggctcagaagt
gtgaacaagagctacccgctgctgtcgacgaaggtcgaggagagcggagagcatgtgatc
attgggacgggggagttgtatctggactcagtgatgcacgatttgcggcggttgttctcg
gagattgagatcaaggtgtcggacccggtgacgaagttctgcgagacggtgctggagacg
agcgcgttgaagtgctatgcggatacaccgaataagaagaaccggttgacgatgatcgcg
gagccgttggagagggggattgcggaggacatcgagcggggacgggtcaacatgcgtatg
tcggcgaaggagcgcggcaagttcttcgaggagaagtaccagtgggacttgttggcgtcg
cggtcaatatgggcatttggccctgatgataacggtccgaatatcttgcttgatgacacg
ctgccttcgcaggtcgacaagaagatgcttggtacggtgaaggagcacatcaaacaggga
ttccagtggggtgcgcgagaaggaccgctatgtgatgaacccatgcgcaacgtgaagttc
cgcatattggacgccagcttggcaccagaacccatcttccgcggtggtggtcagattgtc
ccaacagcgcgccgcgtctgctactcctccttcctcatggccgcccctcgcctcatggag
cccatctatttcgtcgaagtgcaggcccccgccgactgcatctccgccgtctacaccgtt
ctcgcccggcgacgtggccacgtcacgcaagacctccccaaagccggatcccccctctac
accgtcaaagcgctcatacctgtcatcgacgccaacggcttcgagaccgacctgcggacg
gcgacgcagggacaggctttctgcttgcagatcttcgaccactggtcaatcgtgcccggc
gacccgacggacacgagcatcaagttgcgcccgctggagccggcatcggggcaggcgctc
gcgcgggacttggtattgaagacgcggaggagaaagggtctgggcgaccagattgcggtg
tcaaaatacctggacgatgagtttgtgctggcgctgtcggcgtcggggcatgcggatttg
ttgggttga
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integrated database retrieval system
