Schizophyllum commune: SCHCO_02621549
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Entry
SCHCO_02621549 CDS
T01331
Symbol
SCHCODRAFT_02621549
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
scm
Schizophyllum commune
Pathway
scm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCHCO_02621549 (SCHCODRAFT_02621549)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02621549 (SCHCODRAFT_02621549)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SCHCO_02621549 (SCHCODRAFT_02621549)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_25
AAA_29
ATP-synt_ab
RsgA_GTPase
ABC_ATPase
SMC_N
VapE-like_dom
AAA_15
SRP54
AAA_23
AAA_28
MMR_HSR1
NACHT
AAA_33
Arf
AAA
PduV-EutP
cobW
Zeta_toxin
AAA_22
Motif
Other DBs
NCBI-GeneID:
9585859
NCBI-ProteinID:
XP_003037849
UniProt:
D8PP22
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAGPEETITVQNLNFSHRSALAPSLIDITLHIPKGSRTVLVGANGAGKSTLLQVLAGKRM
VKDTAIIVKGQDVFRKTPEGIAYLGTEWAMNPVVRRDIVVSNFLDSVGGYRYKERRDRLL
DILDIDMDWHMHEISDGERRRVQLCFGLMVPWDVLLLDEVTVDLDVMVRDDLLNFLVQDS
EERGATIIYATHIFDGLNKFPTHVAHMRLGEFVRPPTPWSPSTEPESLYTVALKWLREDR
AFRLELEKQGKKPRGARRDETVPSDSETFYRKYDYSH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccccgaagagaccatcaccgtccagaacctcaacttctcgcatcgcagtgca
ttggcaccgtcgttgattgacattaccctccacattccgaagggatcgcggacggtcctg
gtcggcgcgaatggagctgggaagtcgaccctcctgcaggtcttggcagggaagcggatg
gtcaaggacaccgcaatcatcgtgaagggtcaggacgtcttccgcaagacgcctgagggg
atcgcgtaccttgggacggagtgggctatgaacccagtcgtccgacgcgacatcgtggtg
tccaacttcctcgactctgtaggcggctatcgctacaaggagcgacgcgatcggctcctc
gacatcctggatattgatatggattggcacatgcacgagatctccgatggcgagcgccga
cgcgtgcagctctgcttcggtctcatggttccgtgggatgtcctcctgctggacgaggtc
accgtcgatctcgatgtcatggtgcgcgacgacctattgaactttctagttcaggatagc
gaggagcgcggggcgaccatcatatacgcgacacacatcttcgatggtttgaacaagttc
cccacccacgtcgcgcatatgcgcctgggtgaattcgtgcgccctccgaccccatggtcg
ccttcgacggaacccgagtccttgtacaccgtagccctcaaatggctgcgggaggatcgc
gcgttccgcctcgagcttgagaagcagggcaagaaaccgcgcggtgctcgtcgcgacgag
accgtcccctccgactcggagacgttctaccgcaagtatgactacagccactag
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