Solitalea canadensis: Solca_3952
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Entry
Solca_3952 CDS
T02084
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scn
Solitalea canadensis
Pathway
scn01501
beta-Lactam resistance
scn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Solca_3952
01503 Cationic antimicrobial peptide (CAMP) resistance
Solca_3952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scn03036
]
Solca_3952
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scn02000
]
Solca_3952
01504 Antimicrobial resistance genes [BR:
scn01504
]
Solca_3952
Chromosome and associated proteins [BR:
scn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Solca_3952
Transporters [BR:
scn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Solca_3952
Antimicrobial resistance genes [BR:
scn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Solca_3952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
HlyD_2
YfdX
PTS_EIIA_1
NQRA_N
OEP
Motif
Other DBs
NCBI-ProteinID:
AFD08946
UniProt:
H8KM24
LinkDB
All DBs
Position
complement(4604632..4605810)
Genome browser
AA seq
392 aa
AA seq
DB search
MDMKISEAARLFPFLLLGGVLLTGCGSSAKQDQQQQMPAQELPVITIKSTPASMFTEYTT
SLQGRVNVEVRAQVDGSLLKVLVDEGQYVKAGQPLFKIDDRVYREQVNTAAAAIQSAEAG
LANAQVEIDKLTPLVQNKVVSEIQLKVAKANYQTAKANVEQAKAQLASAKINLGYTTITA
PVSGYIGRLTQRVGSLVGRSTAEPLTVLSDVQEIYGYFSVGEAEFIRFKERYPGKTLEEK
LRNVPGVTLILADGSEYPQKGKVQMGEGQFDKATGSISLRATFPNSGGILRSGNTGKIRI
SEENPSALIVPQESTLEMQDKIFVYTLADSNKVKATPITVGGKSGNAYVVKTGVKEGDKV
VFTGLGSLQDGMKIIPKPINTDSVYKAQLSMK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaaatatcagaagcagctcgtttatttccgtttctattgctaggaggagta
ctgctgacaggttgtggttcatctgctaaacaagatcagcaacaacaaatgcctgctcag
gaacttcccgtgattactatcaaatctactccggcgtcaatgtttaccgaatatactaca
tctcttcaaggcagggtaaatgtggaagtcagagcccaggtggatggttccctattgaaa
gtattggtggatgaaggacaatatgtaaaagctggtcaacctttatttaaaatagacgat
cgcgtttaccgtgaacaggtaaatacagcggcggccgctattcagtctgcagaagctggc
ttagcaaacgctcaggttgagattgacaaattaactcctttggttcaaaataaagtggta
tcagagatacagcttaaagtagcaaaagccaattatcaaactgctaaagctaatgttgaa
caagcaaaagcacaattggcatctgcaaagatcaatcttggatatacaaccattacagct
ccagtaagtggttatattggccgtcttacacaacgtgtaggtagtttggttggaaggtca
actgctgaaccattaactgttttatcagacgttcaggaaatctatggttatttctctgtt
ggtgaagctgaatttattcgcttcaaggaacgttatcctggcaaaacgttggaggaaaaa
ttgagaaatgtgccaggtgttaccttaatcttagccgatggaagtgaatatccacaaaaa
ggtaaagtacaaatgggcgagggtcagtttgataaagccaccggctctatcagcctacgt
gcaaccttccctaatagtggcggcattttgcgttctggaaacaccggtaagatcagaatc
tcggaagaaaatccatcagcactgattgttcctcaggaatcaaccttagaaatgcaagat
aaaatcttcgtttacactttggccgacagcaataaagttaaggctacgccaattaccgtt
ggtggaaaaagtggaaacgcttatgtagtaaaaacaggcgttaaagaaggcgacaaagtc
gttttcaccggattgggcagtctgcaagacgggatgaagatcattcctaagcctataaac
actgacagtgtttacaaggcacagctctcaatgaaataa
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