Solitalea canadensis: Solca_4206
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Entry
Solca_4206 CDS
T02084
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scn
Solitalea canadensis
Pathway
scn01501
beta-Lactam resistance
scn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Solca_4206
01503 Cationic antimicrobial peptide (CAMP) resistance
Solca_4206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scn03036
]
Solca_4206
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scn02000
]
Solca_4206
01504 Antimicrobial resistance genes [BR:
scn01504
]
Solca_4206
Chromosome and associated proteins [BR:
scn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Solca_4206
Transporters [BR:
scn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Solca_4206
Antimicrobial resistance genes [BR:
scn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Solca_4206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
BSH_CusB
YknX_C
CzcB_C
HH_EMRA
Beta-barrel_RND_2
BSH_LcnD
Biotin_lipoyl
BSH_YknX
HH_AAEA_pHBA
YGR130C_N
HH_YBHG
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AFD09196
UniProt:
H8KLP2
LinkDB
All DBs
Position
complement(4890222..4891355)
Genome browser
AA seq
377 aa
AA seq
DB search
MTLCTTRFLILSTVLFASFTSCKPKTAKTSPPVEVSVIKAQQTDVPIYQEYVGQTYGLSD
VDIRARVEGWVTGVHFKEGTKVKKGTLLYTIDDIQYQTRVDQAAGNLASAKTEVARAQSQ
LNRVKPLADMNALSKQDLDNAVAEFNAAKARQQVTEAALQNAKIELGYAKVYAPIDGIIG
ISNVRVGDYVSRTSSNILSTVSQTGTVRVRFQITETEYLRFAREFKKINERMREVSLILP
DNSVFNEKGHVDFANRQIDPQTGSITLEASFDNQSGLLRPGLYVKVQLLTQSFSNAIVVP
QRAVTQLQNLYQVFIVDNTNTLKVKVIEPGPRVGDMWIITKGLTPGERVALIGTMALTDK
SKVTPVETKWTPAAKLE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgactctttgtacaacaaggttccttattctgtcaaccgttttgtttgcaagtttcact
tcctgcaaacctaaaactgctaaaactagtcctccggttgaagtttcagttatcaaagca
caacaaacagatgtgcccatataccaggaatacgtaggtcaaacgtatggcttatccgat
gttgatattcgggcacgcgtagaaggatgggttactggtgttcacttcaaagaaggcacc
aaagtaaaaaagggcacactcctctatacgatagacgatatccaataccaaactagggtt
gatcaggcagcaggaaatctagcatcagcaaaaactgaagttgccagagcacaaagtcaa
ctaaatagggtaaaacctttagcagatatgaatgcattaagcaagcaggatcttgataat
gctgttgcagaattcaatgcagcaaaggcacgtcaacaagttactgaagctgcacttcaa
aatgctaaaatagaactcggttatgcaaaagtatatgcaccgatagacggcattattggt
atttcaaatgttcgggtaggcgattatgtaagccggacatcatctaatatcctttcaacc
gtttctcaaaccggaaccgttcgtgtacgattccagatcactgaaacggagtatttacga
tttgcgcgtgagttcaagaaaattaatgagaggatgcgtgaggtatcattaatacttccc
gataacagtgtgttcaacgaaaaaggtcacgtagattttgccaaccgccaaattgaccct
caaacaggatcaatcacacttgaagcatcatttgataatcagtcgggcttgttaaggcca
ggactatatgttaaggttcagttattaacccaaagcttctcaaatgcgatagttgttccg
cagcgagcagtaactcaacttcaaaatctttaccaggtatttattgtggataacaccaat
acgcttaaagttaaggttattgagccaggaccaagagttggtgatatgtggataataact
aaaggccttactccaggcgagcgagttgcacttattggtacaatggcattaacagacaag
tctaaagttacacccgtggaaaccaaatggactccggctgctaaacttgaataa
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