Snodgrassella communis: PYG29_01470
Help
Entry
PYG29_01470 CDS
T09364
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scom
Snodgrassella communis
Pathway
scom01501
beta-Lactam resistance
scom01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PYG29_01470
01503 Cationic antimicrobial peptide (CAMP) resistance
PYG29_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scom03036
]
PYG29_01470
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scom02000
]
PYG29_01470
01504 Antimicrobial resistance genes [BR:
scom01504
]
PYG29_01470
Chromosome and associated proteins [BR:
scom03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PYG29_01470
Transporters [BR:
scom02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PYG29_01470
Antimicrobial resistance genes [BR:
scom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PYG29_01470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
HH_EMRA
BSH_CusB
Beta-barrel_RND_2
HH_AAEA_pHBA
HH_YBHG
CzcB_C
YknX_C
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
WMY92075
LinkDB
All DBs
Position
330643..331872
Genome browser
AA seq
409 aa
AA seq
DB search
MGTNRRADKWRISAIVLASALALAACGKKENAPAPQAPMVSVLTVRPQTVTIDTELTGRL
KPIRESEVRARVAGVLLKRLFTEGTYVQQGQPLFQIDNAPYLASLQSARASLATAQANAA
KADADVARYRPLVAANAISKQEFDQAIAQQRLAHAQIDSAQAAIKSAQINVGYAYVRAPI
SGRIGKALVTEGALVGQNDVTKLALIQQTHTLYVDLTQTATQAMKIRQDIAAGRMKTING
AVEVAIKLDDGSEYPQKGRLLFTDMTVDEGTGEVKVRAEIPNDNDMLLPGQFVRVEIPQA
EIQNAIVVPQQAVTRGASGDTVTVVNADGSLAIRPVTVVQQKGTDWVISGGLRAGDKVAM
DGLALVQLTGAKKVQTQPWKPASANAPAASPVQAASAPKASAASASQAK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgaatcgaagagcagataaatggcgcatcagtgcgatagtacttgccagtgcg
ctggcattggctgcctgtggcaaaaaagaaaatgcaccagcgccacaagcaccaatggtc
agtgtgctgactgtacgtccgcaaacggtaactatagataccgagctgactggccgttta
aaaccgattcgcgagtcagaagtgcgtgcccgtgtagccggtgttttgctgaaacgctta
tttacagaaggcacctatgttcaacaagggcagccattattccaaattgacaatgcgcct
tatctggcttccctgcaatctgcgcgcgccagtttggctacagcacaggccaatgcagcg
aaagctgatgccgatgttgcccggtatcgcccgctggtagccgctaatgccatcagtaaa
caggaatttgatcaagcgattgcccaacagcgtctggcacatgcacaaattgacagtgca
caggctgcaattaagtctgcacagattaatgttggctacgcatatgtacgtgcgccgatt
tcaggacgcattggtaaggcactggttactgaaggtgcgctggttggccagaatgatgtt
actaaactggctctgattcagcaaacccatactttatatgttgacctaacccagacggcg
acacaggcgatgaaaatccgtcaggatattgccgcgggcaggatgaaaaccatcaatggt
gctgtggaagtagccatcaagctggatgatggcagcgaatatccgcaaaaaggtcgtctg
ctgtttaccgatatgactgtggatgagggcacgggcgaagttaaagtacgcgccgaaatt
ccaaatgataacgatatgttattgccaggtcagtttgtgcgagtagaaattccgcaggct
gaaatccagaatgccattgtggtgcctcagcaagcggtaacccgtggtgccagcggtgat
actgttactgtggttaatgccgatggcagtctggctattcgtccggtaaccgttgttcag
caaaaaggcacagactgggtaatcagcggtggtctgcgcgctggtgataaagtagcaatg
gatggactggcactggtgcagttaaccggtgcgaagaaagttcagacccagccgtggaaa
ccggcatcagccaatgctccagcagcatctcctgttcaggcagcctctgcacctaaggcc
tctgcggcatctgcctctcaggccaagtaa
DBGET
integrated database retrieval system
