Snodgrassella communis: PYG29_04010
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Entry
PYG29_04010 CDS
T09364
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
scom
Snodgrassella communis
Pathway
scom00300
Lysine biosynthesis
scom00550
Peptidoglycan biosynthesis
scom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PYG29_04010
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PYG29_04010
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scom01011
]
PYG29_04010
Enzymes [BR:
scom01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PYG29_04010
Peptidoglycan biosynthesis and degradation proteins [BR:
scom01011
]
Precursor biosynthesis
Amino acid ligase
PYG29_04010
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
SpoVAE
Motif
Other DBs
NCBI-ProteinID:
WMY92533
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Position
858871..860349
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AA seq
492 aa
AA seq
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MFSLKNPLAEYHLSAQTRALVAGRTLRVDSRQVQPGDVFVACQGEYADGRDFIQAAIDKG
AVFVFWDDDGRFRWQASWKVANEAVVDLRQRAGLVAAACYDYPGRDLSIWGVTGTNGKTS
VSQWLAQAADILGKKCAIMGTVGNGYWQQLHDSVNTTMDAVANQTWLRRFVQEHATAVAM
EVSSHGLDQSRVVGVPFASAVFTNLTRDHLDYHHSMQHYGACKASLFYWSGLQHAVINID
DEFGYELWQDLRRARSYLTILAYGFHAQADIHIHQFQASASGMHVHLRTPWGEGVVHTRL
LGRFNAQNLAACVGVLCANGFAFDDVLAVWPQIRPATGRMDCLMGNKQPLVVVDYAHTPD
ALEKALATLQEIKPAGAHLWCVFGCGGDRDAGKRPLMGAAADAGADCVVVTSDNPRTENP
QAIIADILLAIKAPVLVEADRGSAIHYAVQHAAIGDIVLIAGKGHETYQDIGGQKQHFSD
FEVAQAALRQRT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgaaaaatcctttagcagaatatcatttaagtgctcaaactcgtgcactg
gttgcgggtcgtactcttcgggttgacagcagacaggtacagccgggcgatgtatttgtg
gcctgtcagggtgaatacgctgatggacgcgattttattcaggctgctattgataagggc
gctgtatttgtattctgggatgatgatggtcggttcaggtggcaggctagctggaaggtg
gcaaatgaggctgtagtggatttgcgtcagcgtgcaggattggtggccgctgcctgttat
gactatccgggcagggatctatccatctggggtgtaaccggaactaatggtaaaacttcg
gtgtcacaatggctggcacaggctgctgatattcttgggaaaaaatgtgccattatgggt
acggtaggcaatggctactggcaacagctacatgacagtgttaatacaactatggatgcg
gttgccaatcagacatggctgcgccggtttgtgcaagagcatgcgacagctgtggccatg
gaagtgtctagtcatggcttggatcaaagtcgcgtggttggtgtgccttttgccagtgcg
gtatttactaatctgacccgtgatcatttggattatcatcatagtatgcagcactatggg
gcatgtaaagcttcattgttttactggtctggcctgcaacatgctgttatcaatatcgat
gatgagttcggctacgagttgtggcaggatttgcgccgtgctcgttcatatttaactata
ctggcttatggctttcatgctcaggccgatattcatattcatcagtttcaggcctctgct
agtggtatgcatgtacatttacgtacaccatggggtgaaggtgttgtgcatacgcgtttg
ctcgggcgcttcaatgcccagaatctggctgcctgtgttggtgtattgtgtgccaatggc
tttgcttttgatgatgtgcttgctgtctggccgcagattcgtccggctaccggacgtatg
gattgtctgatggggaataaacagccattggtggttgttgattatgcccacacgccagat
gcattggaaaaggcgttggctactttacaggaaatcaaaccagccggtgcacatttgtgg
tgtgtttttggttgtgggggtgatcgtgatgcgggtaagcgaccattaatgggggcagca
gctgatgccggggccgattgtgtggtggtaaccagtgataatccacgtacggagaatccg
caggcaattattgccgatattttactggcaattaaggcgccagtgctggttgaggcagac
cgtggcagtgcgattcactatgctgtgcagcatgcagcaattggtgacattgtgctgatt
gcgggtaaaggtcatgaaacttatcaggatatcggtggtcaaaagcagcatttttctgat
tttgaagtggctcaggcagctttgcgtcaacgcacctga
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