Snodgrassella communis: PYG29_07385
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Entry
PYG29_07385 CDS
T09364
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
scom
Snodgrassella communis
Pathway
scom00020
Citrate cycle (TCA cycle)
scom00785
Lipoic acid metabolism
scom01100
Metabolic pathways
scom01110
Biosynthesis of secondary metabolites
scom01120
Microbial metabolism in diverse environments
scom01200
Carbon metabolism
scom01210
2-Oxocarboxylic acid metabolism
Module
scom_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scom_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PYG29_07385
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PYG29_07385
Enzymes [BR:
scom01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PYG29_07385
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
WMY91256
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All DBs
Position
complement(1621074..1623899)
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AA seq
941 aa
AA seq
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MMEEKTSLSYLYGANAPYIEELYESYLKDRNSVDEYWKDYFDKVAALPGYVAKDIPQLPI
QESFVNLSRQHGTAAQGSVDLNILQKQVSVLNLMNAYRILGSRNANLDPLKRRSKEYLAE
LDPAQYGLTAADMSISFYTGSDFSRSPKLPLSEIINKLDQTYCGTVGVEFMHITRPDERN
WVQERVEKDLSAGSFTPEHKRRILKQLTAAETLERYLHTRYVGQKRFSLEGGESTIVALD
YLTQHCGEQGVEEVMIGMAHRGRLNVLVNILGKEPRDLFSEFEGKYTTTLPSGDVKYHMG
FTSDLATGNGPLHVSLAFNPSHLEIVNPVVEGAVRARQKRRGESGRQAVLPVLIHGDSAF
IGLGVNQANFNLSQTRGYTTGGTIHIVINNQIGFTTSDLRDTRSTVYCTDLAKMVDAPIF
HVNGDDPEAVSYVVSLAMDYRKSFGKDVVVDIVCFRKLGHNEGDDPMLTQPMMYNKIHQH
PGTRALYSDRLVSENVITKEQADGLIQAYRDALDKGEHVEQTTLTDYNHKYAVDWTPYMG
THWNHPVETGIPAADIQRLTAKFTVLPEGFTPHNTVKRMLANRVAMAEGTQPVDWGMAET
LAYASLVSNGNGVRISGEDSGRGTFSHRHAVLHDQKREKSDAGAYVPLRNLSENQASFLV
IDSILNEEAVLAYEYGFACSAPDQLVIWEAQFGDFANGAQVAIDQFITSGETKWGRLCGL
TVILPHGYDGQGPEHSSGRLERWLQLCSEENIQVVMPSEASQMFHVLRRQVLRPYRKPLV
IFMSKRLLRFNESMSPLSDFTEGHAFRPVIGDQVEGNENSVKRVILCAGQVYYDINKARL
ERDLGKDIAIVRVEQLYPFPYEQLAAELSRYPNATEILWAQEEPKNQGAWFQIRHRIEKI
AGSQQKVIFAGRPASASPAVGYMSKHVAQLKQLVDDALELK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaaaaaaccagtctttcttatttatatggtgccaatgctccttacattgag
gagctttatgagagctacctaaaagatcgaaattcagttgatgaatactggaaagattat
tttgacaaagtagctgcattgccgggttacgttgccaaagatataccgcaattaccaatt
caggaatcttttgtcaatctgtccagacagcatggaactgctgctcaaggtagtgttgat
ttaaatattttacaaaagcaggtgtcagtattaaatctgatgaatgcttaccgtattctg
ggtagtcgcaatgccaatctggatccgttaaaacgccgctctaaagagtatctggctgaa
ttggatccggcacaatatggtttgacggctgccgatatgtctattagtttctatactggt
agtgatttttcacgcagtccgaagctccctttatctgaaattattaataaactagatcag
acttactgcggtacggtaggtgtggagtttatgcacattactcgtccggatgaacgtaat
tgggttcaggaacgggtagaaaaagatttatcagcaggtagcttcactcctgaacataaa
cgtcgcattctgaaacaattgactgctgctgaaactctggaacgttatttgcatacccgc
tatgttggccagaaacgtttttcactggaaggcggtgaaagtacgattgttgcactggat
tatctgacgcagcattgtggtgaacagggtgtagaagaagtcatgattggtatggctcac
cgtgggcgcctgaatgtgctggtaaatatccttggtaaagaaccacgcgatttatttagc
gaatttgagggtaaatataccaccactctgccaagcggtgacgtgaaataccatatgggc
tttacttccgatctggctactggcaatggtccgttgcacgtttcgctggctttcaaccct
tctcatctggaaattgttaatccggtagtggaaggtgctgttcgtgcacgtcaaaaacgt
cgcggtgaatctggtcgccaagctgtgctgccggtattgattcatggcgattctgcgttt
atcggtctgggtgtgaatcaggctaatttcaatctgtctcaaacccgtggctacaccact
ggtggcactattcatattgtgatcaataatcagattggctttactacttctgatttgcgc
gatacacgttcaactgtgtattgtaccgatctggctaaaatggttgatgcaccgattttc
catgtgaatggtgatgatcctgaggctgtgagctatgtggtaagtctggccatggactat
cgcaagtcattcggcaaagatgtggtagtagatattgtttgcttccgcaaactgggtcat
aacgaaggtgatgatccaatgctgacacagccaatgatgtataacaagattcatcagcat
ccgggaacacgtgcgctgtattcagaccgtctggtaagtgaaaatgtgattactaaagaa
caggcggatgggctgattcaggcttatcgcgatgcgctggataaaggtgaacatgttgag
cagactacgctgactgattacaaccataagtacgcggtagactggacaccttatatgggt
acacactggaatcatccggttgaaacgggtattcctgccgcagatattcaacgcttaact
gcaaaattcactgtgcttccggaaggttttacaccacataatacggtgaagagaatgctg
gccaatcgtgttgcaatggctgagggtacacagcctgttgattggggtatggctgaaaca
ctggcttatgccagtctggtaagcaatggcaatggtgtgcgcatttcaggtgaagattcc
ggtcgtggtactttctctcatcgtcatgctgtgctgcatgatcagaaacgcgaaaaaagt
gatgccggtgcttatgtgcctctgcgcaatctgagtgaaaatcaggcttctttcttggta
attgattcaatcctgaatgaagaagctgttttagcctatgaatatggctttgcatgcagt
gcacctgatcagctggttatctgggaagcgcagtttggtgactttgccaatggtgctcag
gttgcaatcgaccagtttattacttctggtgaaaccaaatggggtcgtttgtgtggttta
actgtgattttacctcatggctacgatggtcaaggacctgaacattcttctggtcgtctg
gaacgctggctgcaattgtgttctgaagagaatattcaggttgtgatgccatcagaagca
tctcagatgttccatgtgttgcgccgtcaggtattgcgtccatatcgcaagccgctggtt
attttcatgtccaaacgcttgttgcgtttcaatgaatccatgagtccacttagtgatttc
actgaaggtcatgctttccgtccggtaattggtgatcaggttgaaggcaatgaaaacagt
gttaaacgcgtgattctgtgtgccggtcaggtgtactacgatattaataaagcgcgtttg
gaacgtgatctgggcaaagatattgcgattgtacgtgtggaacagctatatccgttccca
tatgaacagctggctgctgaattgagccgctatcctaatgcaactgaaatcctgtgggct
caggaagagccaaaaaatcagggtgcttggttccagattcgtcatcgtattgaaaaaatt
gcaggcagccagcaaaaagttatttttgccggtcgtccggccagtgcttcaccagcagtg
ggctatatgagtaaacatgtagctcagctgaaacaattggttgatgatgctctggaatta
aaataa
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