Salinivibrio costicola: HBA18_13125
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Entry
HBA18_13125 CDS
T06511
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scot
Salinivibrio costicola
Pathway
scot01501
beta-Lactam resistance
scot01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBA18_13125
01503 Cationic antimicrobial peptide (CAMP) resistance
HBA18_13125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scot03036
]
HBA18_13125
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scot02000
]
HBA18_13125
01504 Antimicrobial resistance genes [BR:
scot01504
]
HBA18_13125
Chromosome and associated proteins [BR:
scot03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HBA18_13125
Transporters [BR:
scot02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HBA18_13125
Antimicrobial resistance genes [BR:
scot01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HBA18_13125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
TarH
CusB_dom_1
OEP
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QIR07212
LinkDB
All DBs
Position
1:2818487..2819593
Genome browser
AA seq
368 aa
AA seq
DB search
MKKWFFVMLILALLLFGSVIGFNLFKQQKIAEYMANMPEPTHPVTAVTVAAEPWTPTIDA
IGFIEPNQGITLTTQIAGVVDVINFESGQTVKRGQNLVELDSSVEKANLASTQARLPAAE
AKFKRYQGLFAKGSISKEALDEAEANYRSLQADITALKATIARRNIQAPFDGVIGLRNVF
MGEYLQPGTDIARLEDTSVMKLRFTVPQTDIAKIRLSQPLRITVDAYPEMEFIGSISAIE
PAVNSQSGLIKVEANIPNNDGQLRSGMFARADIILPTIEDQIVIDQTAINFTLYGESVYV
IREEDGEKRAYQQVLKVGERRGHQVRIIDGLAPGDLVVTSGQVRLSNGSKVKIVENDALT
PPEQLPQL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatggttttttgtcatgctgatccttgcactgctgctgtttggcagtgtgatt
ggctttaacctgttcaagcagcaaaagatagcggaatatatggcaaatatgccggaacca
acccatccggtcacggccgtgacggttgctgctgagccatggacccccaccatcgacgca
attggttttatcgagccaaatcaaggtattaccctaaccacgcaaattgcaggggtggtc
gatgtgatcaattttgaatctggccaaaccgtcaaacggggtcaaaatttggtggaactt
gactctagtgttgaaaaagccaacctcgccagcacccaagcgcgcctgcctgctgcggaa
gcgaagtttaagcgctaccaaggtttgtttgccaaaggctccatctctaaagaggcactc
gatgaagccgaggcgaattatcgttcgttacaagcggatatcacggcgctaaaagccacc
atcgctcgtcgtaatatccaagcgccgtttgatggggtcataggtctgcgtaatgtcttc
atgggtgaatatttgcagccaggtaccgatattgctcgtttagaagacacctctgtcatg
aagcttcgctttaccgtgccacaaacggacattgctaaaatccgtctcagtcagccacta
cgtatcaccgttgatgcgtatccagaaatggagtttatcggctcaattagtgctatcgag
cctgccgtcaatagtcagagcggcctgattaaagtagaagccaacattcccaacaacgac
gggcaactgcgctcagggatgtttgcgcgtgcagacatcattttgcccactattgaagat
caaatcgtgattgaccaaaccgcgatcaacttcactttgtatggcgaaagtgtgtacgtg
atccgtgaagaagatggcgaaaagcgtgcttatcagcaagtgcttaaagtgggcgagcgt
cgtggccaccaagtccgaatcattgatggtctcgcacctggcgatctcgtggtaacgtcc
ggccaagtgcgcttgagcaacggttcaaaagtgaaaatcgtcgaaaatgacgctctcaca
ccaccagaacaattacctcaattgtaa
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