Salinivibrio costicola: HBA18_13130
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Entry
HBA18_13130 CDS
T06511
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
scot
Salinivibrio costicola
Pathway
scot01501
beta-Lactam resistance
scot01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBA18_13130
01503 Cationic antimicrobial peptide (CAMP) resistance
HBA18_13130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scot02000
]
HBA18_13130
01504 Antimicrobial resistance genes [BR:
scot01504
]
HBA18_13130
Transporters [BR:
scot02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HBA18_13130
Antimicrobial resistance genes [BR:
scot01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HBA18_13130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QIR07213
LinkDB
All DBs
Position
1:2819606..2822698
Genome browser
AA seq
1030 aa
AA seq
DB search
MRFTDIFIRRPVLAASISILIALLGLQSLFKMQVREYPEMTNTVVTITTSYYGASADLIQ
GFITTPLEQAVAQADNIDFMTSESVLGTSTITVNMKLNTDPNAALADILAKVNSVRAQLP
TEAEDPSVSMSTGSTTAVMYIGFTSPELDSSQITDYLERVVKPQLFTVNGVSKIDLYGGV
KYGLRVWLDPQKMAGFNLTATDVMSVLSANNYQSATGQAIGTYMVYNGSADTQVSTPEEL
SNLVVETQEGRVVRLGDIAKVSLEKSHDRFRAIANGSEAVVAAVNAAPTANPIDIAEDVT
AMLPEIERNMPGNIQMNVLYDSTKAINESIHEVVKTIIEAAIIVLVVITLFLGSFRAVII
PIITIPLSLIGVALVMEMIGFSLNLMTLLAMVLAIGLVVDDAIVVLENIDRHIKLGESPF
RAAIIGTREIAVPVISMTLTLAAVYAPIAMMGGITGSLFKEFALTLAGAVFVSGIVALTL
SPVMCSSMLKAHAKPSRFELAVHRFLDGMTERYAGMLDKVMQRRPVILSFAVIVFASLPV
LFSFIPSELAPSEDKGVVVMMGTAPSTANLDYIQNTMAEVNQKLDEQPEVAFSQVFSGVP
KSNQAFGIASLVPWSEREASQSEIVKRMAEEVKDIPGMKVTTFEMPELPGASSGLPIQFV
VTTPNNFESLYQVTAEIMSEVQSSPNFVYSELNLNFDSATMNISIDKDKAGSYGVTMRDI
GATIGTMMADGYVNRIDFDGRSYEVIPQVERKYRLNPESIEGYYVRAANGESIPLGSLID
IDITAEPRSLPHFNQLNAATISAVAAPGVTMGTAVDWFESKAAELPKGYQHDYLGESRQY
VTEGSALYATFLFALAIIYLVLAIQFESLLDPLVILVSVPLAICGALIALAWGLSSMNIY
SQVGLITLIGLITKHGILICEVAKEQQLHHQASRMDAVKEAAKIRLRPILMTTAAMIAGL
IPLMFATGAGAEQRFSIGIVIVAGLAIGTLFTLFVLPVIYTYLASKHKPLPVFVEDDELD
KLDKDYHASH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttactgatatttttatccggcgcccagtactggcagcctcaatcagtatactg
attgcgctgctaggcttgcagtcgctctttaagatgcaagtcagggaatacccggaaatg
accaataccgtggtcaccatcacaaccagctactatggtgccagtgccgatttgattcag
gggtttatcaccaccccactcgaacaggccgtcgcccaagctgacaatattgactttatg
acctcagaatcggtgctggggacctcgacgattaccgtcaacatgaagctaaacacggat
ccgaacgcggcactggccgatattcttgccaaggtcaattcggtgcgtgcacagcttccg
actgaggcagaggacccctcggtatcgatgtcgacgggttcaaccactgcggtgatgtat
atcggctttacctcaccggagctcgattcaagtcagatcactgattacctcgagcgcgtc
gtgaagcctcagctgttcaccgtgaacggggtgtcgaaaatcgacttatacggcggggtg
aaatacggtctacgtgtttggctggatcctcagaaaatggccgggtttaacctaacggcc
acggatgtcatgtcggtactgagtgccaataactaccaatccgccaccggtcaagctatc
ggaacctatatggtttataacggtagcgcagacacccaggtgtcgaccccagaagagctc
agtaacttggtggtcgagacccaagagggtcgcgtggtgcgccttggggatattgccaaa
gtctcgctagagaaaagccatgatcgcttccgcgccattgcgaatggctcagaggcagtg
gtcgcggcggtcaatgcagcacctaccgccaaccccattgatattgccgaagacgtgact
gcaatgctccccgaaatcgagcgcaacatgccgggcaatatccaaatgaacgtactgtat
gactctaccaaagcgattaatgagtccattcatgaggtagtaaaaaccatcattgaagcg
gccattatcgtactggtggtgattaccttgttcttgggctcattccgcgccgtgatcatt
cctatcatcaccattccgttgtcattgattggtgtggccttggtcatggaaatgattggt
ttctcgctgaacttgatgacgctactggcgatggtgttggccatcggcttggtggttgac
gatgcaatcgtggtcctcgaaaacatcgaccgacatatcaagctgggtgaatcgcctttc
cgcgcggccattattggtacgcgggagattgccgtgccagttatctcaatgacactgaca
ctggcggctgtgtatgcccctatcgccatgatgggcgggatcaccggctcactgtttaag
gagtttgcgcttacacttgccggggccgtgtttgtctcggggattgtggcactcactctc
tcgccagtgatgtgttcatcgatgttaaaagcccacgcaaagccaagccgttttgaattg
gcagtccaccgtttcttggacggtatgacagagcgctacgctggcatgctggataaggtg
atgcaacgtcgtccggtgatcttgtctttcgccgtgatcgtgtttgcgtccttgccggtt
ctgttcagctttatccccagcgagcttgcgccttcggaggataaaggggtggtcgtgatg
atgggtactgctccctcgaccgctaacttggattacatccaaaacaccatggcagaagtg
aaccaaaagctcgacgaacaaccagaagtggccttctctcaggtcttctctggcgtacct
aagtcgaatcaagcatttggtattgcttctctggtgccatggagtgagcgtgaagccagt
cagtcagaaatcgtgaagcgcatggccgaggaagtgaaagacattccgggcatgaaagtc
accacctttgagatgccagagctccccggcgcctcgtctggcttaccaatccaattcgtg
gtgacgacaccgaataacttcgaaagtctctatcaagtgacggctgagatcatgtcagag
gttcaatctagcccgaatttcgtctattcggagctgaaccttaactttgactcggccacc
atgaatatcagcattgataaagacaaggcgggttcctacggcgtgaccatgcgagacatc
ggtgccaccattggtaccatgatggcggatggctacgtgaatcgtatcgactttgatgga
cgctcttatgaagtgatcccacaagttgagcgtaaatatcgcctcaatcctgagtctatc
gaaggttattacgtacgcgcggcaaatggtgagtcaattccactcggttcgctgattgat
atcgacattaccgcagagccacgttcactgccgcacttcaaccaattgaatgccgccaca
atcagtgcagtggcagcgcctggcgtaaccatggggaccgccgttgactggtttgaaagc
aaagcggcagagttgcctaaaggctatcaacacgattacctcggtgaatctcgccaatac
gtcacagaaggtagcgcactctatgccaccttcttgttcgcgctggcgatcatttatttg
gtccttgcgattcagtttgaatccttgctcgacccactggtgatcttggtctctgtaccg
ctcgccatttgtggtgcattaattgcactcgcatgggggctgtcgtcgatgaatatctac
tcgcaagtcgggttgatcaccttgataggtctgattaccaaacacggtattttgatctgt
gaggtggccaaagagcagcagctgcatcatcaagccagtcggatggatgcggtcaaagaa
gcggctaaaattcgcttgcgcccgatcttaatgaccactgcagcaatgattgctggcttg
atccctctgatgttcgcgaccggcgcaggtgccgagcaacgctttagcatcgggattgtg
atcgtggcaggtcttgctatcggtaccttgtttaccctattcgttttgccagtgatttac
acctatctggccagcaaacacaaaccactgcctgtgtttgtcgaagacgatgagctcgac
aagctcgataaagactatcacgcgtcacactaa
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