Sorangium cellulosum So0157-2: SCE1572_17235
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Entry
SCE1572_17235 CDS
T02718
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu01501
beta-Lactam resistance
scu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCE1572_17235
01503 Cationic antimicrobial peptide (CAMP) resistance
SCE1572_17235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scu02000
]
SCE1572_17235
01504 Antimicrobial resistance genes [BR:
scu01504
]
SCE1572_17235
Transporters [BR:
scu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SCE1572_17235
Antimicrobial resistance genes [BR:
scu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SCE1572_17235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
AGP36090
UniProt:
S4XW12
LinkDB
All DBs
Position
4874000..4877305
Genome browser
AA seq
1101 aa
AA seq
DB search
MQALARICIQRPVFAAMLGLALIVVGAVAYFRLGVDRFPAVDLPTVSVRTTLPGGAPEDV
EAEITEEIEEAVNTVEGITELRSISSSGSSVVIATFNLDRDVDSAAQDVRDRVQAALRRL
PVGTDPPVIAKQDNDSTPVMTIALSADRSIRELTEIADKLVRVQLERSAGVGEVRVVGGQ
ERAIKIWLSADRLAAYGLPITAVREAIVQQNANIPAGNITGKEEERTLRTMGRLEHAGDF
NNLVVGNVDGRPIRVRDIGRAEDGTYEQRSLARLDGRPTVVLDVVRQSGANTVAVIEAVK
ANVAKLSDQLPSDVKLEVIRDQSGYIYTALHEINVHLVLGSFLACAVVLLFMRSWRSTII
AGVAIPTSVVATFGMMWALDFTLNSVTMLALVLMVGIVIDDAIVVLENIFRFVEEKKMDS
FEAARAATQEIGLAVLATTLSLVVIFVPVSFMSSISGRFLFQFGITATVAILVSLLVSFS
LTPMMSARLLRKEASRAHGSADAGGGGEAATRTGFYGRLEAKYMGALAFAMRHRALVATF
AVLVTASAVPLYGLVKQEYIPSGADDAEFEIRVSAPLNASIGAMDDVMRRISDDVRSVRG
VRSVLATAGGGFIGGVSSGEAFVRIAPHDERTFSLTRLFRETFSGNPLRAFKDNYAQSEV
MQEVRRKLRKYTDLRISVRNVPSFNIGGGNFEIDFAIQGPDIAALERYANELRDRSAQLG
GIVDADVTLKIDRPELRVIIDRERAAALGVRTEDIASALRLMVGGDQEVSRFRDEEANEN
YDVQLRLVEGDRDQLAAVRRLYVPRTARPQAGSAGAAAAPAAGAPLLRGDLVRLDNLVRI
EEAKSPSRIDRLDRQRVSSLRAGVAPGYALADRLEALRGAAREMDMPSAYTTSVRGRGAE
LERTFGEFIWAFLLSIVLMYMILASQFESLVHPVTILLSLPLSVPFALLSLWATGNTLNL
YSALGFLVLFGVVKKNSILQVDHMNKLRAEGMPRAEAILHANRDRLRPILMTTLALVAGM
LPLWLGTGPGAEERHTIAVVVIGGQSLSLLLTLIVTPVSYSLLDDLAHSERWGRVRARIG
AFGERTSARLGRLFARARRST
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgctcgccaggatctgcatccagcggcccgtgttcgccgcgatgctggggctc
gccctcatcgtcgtcggcgccgtggcgtacttccggctgggcgtggatcgcttccccgcc
gtggacctgccgacggtctcggtccgcaccacgctccctggcggcgcgcccgaggacgtc
gaggcggagatcaccgaggagatcgaggaggcggtcaacacggtcgaggggatcaccgag
ctccgctcgatctcgtcgagcggcagctccgtcgtcatcgccaccttcaacctggaccgg
gacgtcgactcggcggcgcaggacgtgcgcgatcgcgtgcaggcggcgctgcgccgcctg
ccggtgggcacggatccgcccgtcatcgcgaagcaggacaacgactcgaccccggtgatg
acgatcgccctctccgccgatcgctcgatccgggagctcaccgagatcgccgacaagctc
gtgcgcgtgcagctcgagcgctccgcgggcgtcggcgaggtgcgcgtcgtcggcgggcag
gagcgcgcgatcaagatctggctctccgccgatcggctcgccgcctacggcctcccgatc
accgccgtccgcgaggccatcgtccagcagaacgcgaacatccccgcgggcaacatcacg
ggcaaggaagaggagcggacgctgcgcacgatgggtcgcctcgagcacgcgggcgacttc
aacaacctcgtcgtcgggaacgtcgacgggaggcccatccgggtgcgcgacatcggccgc
gccgaggacggcacctacgagcagcggtcgctcgcgcgcctcgacgggaggcccaccgtc
gtcctcgacgtcgtgcggcagtcgggcgcgaacacggtcgcggtgatcgaggccgtgaag
gcgaacgtggcgaagctctccgatcagctcccctcggacgtgaagctcgaggtgatccgc
gaccagtcgggctacatctacaccgcgctgcacgagatcaacgtgcacctcgtcctcggc
agcttcctggcgtgcgcggtcgtgctcctgttcatgaggtcgtggcgatccacgatcatc
gcgggggtcgccatcccgacgtcggtcgtcgcgacgttcgggatgatgtgggcgctcgac
ttcacgctgaacagcgtgacgatgctggcgctcgtcctgatggtgggcatcgtcatcgac
gacgccatcgtcgtcctcgagaacatcttccgcttcgtcgaggagaagaagatggactcc
ttcgaggcggccagggccgccacgcaggagatcgggctggccgtgctcgcgacgacgctg
tcgctcgtcgtcatcttcgtccccgtgtcgttcatgtcgtcgatctcggggcggttcctg
ttccagttcgggatcacggccaccgtcgcgatcctcgtgagcctgctcgtcagcttctcg
ctgaccccgatgatgagcgcgcgcctgctccgcaaggaggcgagccgcgctcacgggtcg
gccgacgcgggcggcgggggcgaggcggcgacgcgcacgggcttctacgggcggctcgag
gccaagtacatgggcgccctcgcgttcgcgatgcggcaccgcgcgctcgtcgccaccttc
gccgtcctcgtgacggcctcggcggtgccgctctacgggctcgtgaagcaggagtacatc
ccttccggcgcggacgacgcggagttcgagatccgcgtctcggccccgctgaacgccagc
atcggcgcgatggacgacgtgatgcggcggatcagcgacgacgtgcgctcggtgcgcggg
gtgcgcagcgtgctcgccacggcgggcggcggcttcatcggcggcgtcagctcgggcgag
gcgttcgtccggatcgccccgcacgacgagcgcaccttctccctgacgcggctgttccgc
gagacgttctccggcaaccccctccgcgcgttcaaggacaactacgcgcagagcgaggtg
atgcaggaggtgcggcgcaagctgcgcaagtacaccgatctccggatctcggtccgcaac
gtgccgtcgttcaacatcggcggcggcaacttcgagatcgacttcgcgatccaggggccg
gacatcgcggcgctcgagcgctacgcgaacgagctccgggaccggtccgcgcagctcggc
ggcatcgtggacgcggacgtgacgctgaagatcgaccggcccgagctgcgggtgatcatc
gatcgcgagcgcgccgcggcgctcggggtccggaccgaggacatcgcgagcgcgctgcgc
ctgatggtgggaggcgatcaggaggtctcgcgcttccgcgacgaggaggccaacgagaac
tacgacgtgcagctccggctcgtcgagggggatcgcgatcagctggcggccgtccgccgg
ctctacgtgccgcggacggcgcggccgcaggcgggcagcgccggcgccgcggcggcgccc
gcggcgggcgcgccgctgctccggggcgacctggtgcgcctcgacaacctggtgcgcatc
gaggaggcgaagagcccgtcgcgcatcgatcggctcgatcgccagcgggtctcgagcttg
cgggccggcgtggcgcccggctacgcgctggccgaccggctcgaggcgctgcgcggcgcg
gcgcgggagatggacatgccgtcggcgtacacgaccagcgtgcgcggccgcggcgcggag
ctggagcgcacgttcggcgagttcatctgggcgttcctcctgtcgatcgtgctcatgtac
atgatcctggcgtcgcagttcgagagcctcgtgcacccggtcacgatcctgctctcgctg
ccgctgtcggtgccgttcgcgctcttgagcctgtgggcgaccgggaacacgctgaacctc
tactcggcgctcggcttcctcgtgctgttcggcgtcgtgaagaagaactcgatcctccag
gtcgatcacatgaacaagctccgcgccgagggcatgccgcgggcggaggcgatcctccac
gcgaaccgcgatcggctgcggccgatcctgatgacgacgctggccctggtcgcgggcatg
ctcccgctctggctgggcacggggcccggggccgaggagcgccacacgatcgcggtggtg
gtcatcggcggccagtcgctgagcctgctcctcacgctgatcgtcacgccggtctcgtac
tcgctgctcgacgatctcgcgcacagcgagcgctgggggcgcgtccgggcgcgcatcggc
gccttcggcgagcggacgtccgcgcggctcgggcggctcttcgcgcgcgcgcgcaggtcg
acgtag
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