Sorangium cellulosum So0157-2: SCE1572_48125
Help
Entry
SCE1572_48125 CDS
T02718
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu01501
beta-Lactam resistance
scu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCE1572_48125
01503 Cationic antimicrobial peptide (CAMP) resistance
SCE1572_48125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scu02000
]
SCE1572_48125
01504 Antimicrobial resistance genes [BR:
scu01504
]
SCE1572_48125
Transporters [BR:
scu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SCE1572_48125
Antimicrobial resistance genes [BR:
scu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SCE1572_48125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
zf-SCNM1
Motif
Other DBs
NCBI-ProteinID:
AGP41590
UniProt:
S4YB80
LinkDB
All DBs
Position
13500011..13503178
Genome browser
AA seq
1055 aa
AA seq
DB search
MQWLARVCVKRPVFASVLMLVIVVLGAAGYTRLGLDQFPDIDVPYVVVTTRLDGAAPEEV
ETEISDRIEGAVNTISGIEDLRSTSSQGVSQVVVGFTLEKDADVAAQEVRDKISAVLPSL
PKGIDPPIVSRIDLGAAPVLLVSVESDRPIRELSEIADKQVRRQIEGISGVGQVNVIGAQ
SRQINVWLDPIALRAQGITAAEVQRAIAAQNLMTPGGSVETGPEDLTLRVMGRVDSPEAL
GRIVLRQQDGRAVRLADVARVEDGRAEEKTWAQLDRRRAVLLSIVKQSGQNTVAVVDTVK
ARLAEVQRSLPEGTKIEVVRDGSRVIRTGIAAVKEHLVLGALLAAAVVLLFLGNARSTLI
AALAIPISVIGTFAVMWVAGFTLNFLTLLALALAVGIVIDDAIVVLENIVRYIDEKGMKP
FPAAVLATKEIGLAVLATTLSLMAVFIPVAFMPGMVGRFLKSFGLTMAFAIGVSLIVSFS
LTPSLAARWLSGHRQAGAHAKPSILERAVDVFYRPIERAYMAALAWVMKRRWVIVVASVA
ALGSCGPIAKTLPAGFLPEDDQAQFEISLRAPEGTSLTSTRLIAERIADDVRRLPGVTST
LMTVGEGEQQASNVAKIYVMLVDPEQRALGQLEIMQEARDEILAKLPPELRVTAGEVQAI
SSGGQATGRIQVALQGPDLDRLAEYATRITEELRKVPGAVDVDNSLVVGKPELRAIIDRD
RAADLGVQVADVAGALQLFVGGLKVSTYSEAGEQYDVRVRADAKHRADAQGLSFLSVPSS
KHGAVPLDSVVALEPDSGPSSIGRLGRRRQITISANAAPGVGDTAVQAALDRIIAEQKMP
AGYSTQAVGSSKNTASTATSFAVVIGLAFVFMYLILAAQFESWLHPITILLSLPLTVPFA
LLSLKLFGQSLNLFSGLGLLVLFGVVKKNAILQIDHTNHLRAEGMPRLQAILQANKDRLR
PILMTTIAFVAGMIPLVLSHGVGSGQNRTTGAIVLGGQSLSLVLTLLAVPVAYSLFDDAA
EWLRRRRGRRAEDRGEAELDALLAAPEASAAAGGE
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggctcgcccgcgtttgcgtcaagaggcccgtcttcgcgtcggtcctcatgctg
gtcatcgtggtcctcggcgccgccggctacacccggctcggcctcgaccagttccccgac
atcgacgtcccgtacgtcgtcgtcacgacgcgcctcgacggcgcggcgcccgaggaggtc
gagaccgagatctccgaccggatcgagggcgcggtgaacaccatcagcggcatcgaggac
ctccggtcgacctcgagccagggcgtgagccaggtggtcgtcggcttcacgctggagaag
gacgccgacgtcgccgcccaggaggtgcgcgacaagatcagcgccgtcctgcccagcctg
cccaagggcatcgatccgccgatcgtgagcaggatcgacctcggcgcggccccggtgctg
ctcgtctccgtggagtcggaccggccgatccgcgagctcagcgagatcgccgacaagcag
gtgcgccggcagatcgagggcatctccggcgtcggtcaggtcaacgtgatcggcgcgcag
agccggcagatcaacgtctggctcgacccgatcgccctcagggcgcaggggatcaccgcg
gccgaggtgcagcgcgcgatcgcggcgcagaacctgatgaccccgggcggcagcgtcgag
accggccccgaggatctcaccctccgcgtgatggggcgcgtcgactcgcccgaggccctc
ggccgcatcgtcctccggcagcaggacggccgcgcggtgcgcctcgcggacgtcgcccgc
gtcgaggacggccgcgccgaggagaagacgtgggcccagctcgaccggaggcgcgccgtc
ctcctgtcgatcgtcaagcagtcgggccagaacaccgtcgccgtcgtcgacacggtgaag
gcgcgcctcgccgaggtgcagcgctcgctgcccgaggggacgaagatcgaggtcgtgcgc
gacggctcgcgggtgatccgcaccggcatcgccgccgtgaaggagcacctcgtgctcggc
gccctcctcgccgcggcggtggtgctcctcttcctcggcaacgcccgcagcaccctgatc
gcggcgctcgccatcccgatctcggtcatcgggacgttcgcggtcatgtgggtcgccggc
ttcacgctcaacttcctcacgctcctcgcgctcgcgctcgccgtcggcatcgtgatcgac
gacgcgatcgtcgtgctcgagaacatcgtccgctacatcgacgagaagggcatgaagccg
ttcccggccgccgtcctggcgaccaaggagatcggcctcgcggtgctcgcgaccacgctc
tcgctcatggcggtcttcatcccggtcgcgttcatgcccggcatggtggggcgcttcctc
aagagcttcggcctcacgatggccttcgccatcggcgtctcgctcatcgtgagcttctcg
ctcacgccgtcgctcgccgcgcggtggctctcggggcacaggcaggcgggcgcgcacgcg
aagccctcgatcctcgagcgcgccgtcgacgtgttctaccggccgatcgagcgcgcctac
atggccgcgctcgcgtgggtgatgaagcggcgctgggtgatcgtcgtcgcgtcggtggcc
gcgctcggctcgtgcggccccatcgccaagacgctgcccgccgggttcctcccggaggac
gatcaggcccagttcgagatcagcctgcgcgcgccggaggggacgagcctcacctcgacc
cgcctcatcgccgagcggatcgccgacgacgtgcgccggctcccgggcgtcacgagcacg
ctcatgacggtcggcgagggggagcagcaggcctcgaacgtcgccaagatctacgtgatg
ctcgtcgatccggagcagcgcgcgctcgggcagctcgagatcatgcaggaggcgcgcgac
gagatcctcgccaagctgccgcccgagctgcgcgtcacggccggcgaggtgcaggcgatc
tcgtccggcggccaggcgacggggcggatccaggtggcgctccaggggccggatctcgac
cggctggccgagtacgcgacgcgcatcaccgaggagctgcggaaggtccccggcgcggtg
gacgtcgacaacagcctcgtcgtgggcaagcccgagctccgcgcgatcatcgatcgcgat
cgcgccgcggatctcggcgtccaggtggccgacgtggccggcgcgctccagctcttcgtc
ggcgggctcaaggtctccacgtactcggaggccggcgagcagtacgacgtccgcgtgcgc
gccgacgcgaagcaccgggcggacgcgcagggcctctcgttcctctcggtcccctcgtcc
aagcacggcgccgtcccgctcgacagcgtggtcgcgctggagcccgacagcgggccctcg
tcgatcggccgcctcggccggcgccggcagatcacgatcagcgcgaacgccgcgcccggc
gtcggcgacacggcggtgcaggcggcgctcgaccggatcatcgccgagcagaagatgccg
gcgggctactccacgcaggcggtggggagctcgaagaacacggcgagcacggcgacgagc
ttcgccgtggtcatcggcctcgcgttcgtgttcatgtacctgatcctcgcggcgcagttc
gagtcgtggctccacccgatcacgatcctgctctcgctgccgctcacggtgccgttcgcg
ctgctctcgctgaagctcttcggccagtcgctgaacctgttctcggggctcggcctcctc
gtcctcttcggcgtggtgaagaagaacgcgatcctccagatcgaccacacgaaccacctg
cgggccgaggggatgccgcggctccaggcgatcctccaggcgaacaaggaccggctccgg
ccgatcctgatgacgacgatcgccttcgtcgccggcatgatcccgctcgtgctctcgcac
ggcgtcggctcgggccagaaccggacgaccggggccatcgtgctgggcggccagtcgctc
tccctggtcctcacgctgctcgcggtgccggtggcctactcgctcttcgacgacgcggcc
gagtggctccgccgccgccgtggcaggcgggcggaggacaggggcgaggccgagctcgac
gcgctgctcgccgcgcccgaggcgagcgcggcggcgggcggcgagtga
DBGET
integrated database retrieval system
