Streptomyces sp. CdTB01: AS200_15985 Help Entry AS200_15985       CDS       T04240                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism scx  Streptomyces sp. CdTB01 Pathway scx03030   DNA replication scx03410   Base excision repair scx03420   Nucleotide excision repair scx03430   Mismatch repair Brite KEGG Orthology (KO) [BR:scx00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AS200_15985    03410 Base excision repair     AS200_15985    03420 Nucleotide excision repair     AS200_15985    03430 Mismatch repair     AS200_15985  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:scx03032]     AS200_15985    03400 DNA repair and recombination proteins [BR:scx03400]     AS200_15985 Enzymes [BR:scx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AS200_15985 DNA replication proteins [BR:scx03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AS200_15985 DNA repair and recombination proteins [BR:scx03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AS200_15985    NER (nucleotide excision repair)     GGR (global genome repair) factors      AS200_15985    MMR (mismatch excision repair)     DNA ligase      AS200_15985   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AS200_15985 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH_5 HHH Zn_ribbon_TFIIB Motif Other DBs NCBI-ProteinID:  ALV33364 UniProt:  A0A0U3QA05 LinkDB All DBs Position complement(3630685..3632877) Genome browser AA seq 730 aa AA seqDB search MAGDKQAETTVPAEAREKHAQLAEQIEEHRFRYYVKDAPVVSDADFDKLLRSLEALEDEY PELRTPDSPTQKVAGAYETEFTSVEHRSRMLSLDNAFNDEELAAWADRVAKDVGGSVYHL LCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPDRLDGDEVPNLVEI RGEVYFPMEKFLDLNERLVAAGDKPFANPRNAAAGSLRQKDPRVTAGRPLHMVVHGIGAL EGFEGMNRLSEAYDLLKTWGLPTSRHNRVVDGLDGVREFIAYYGENRHSVEHEIDGVVVK LDEIRLQGRLGSTARAPRWAIAYKYAPEEVNTKLIDIKVGVGRTGRVTPYAQVEPVTVAG SEVEFATLHNQDVVKAKGVLIGDTVVIRKAGDVIPEILGPVVDLRDGSEREFVMPGECPE CGTPLRPMKEGDIDLRCPNGRTCPAQLRERVSYLAGRECLDIEHFGDVAAAALTRPLEPA DPPLVDEGDLFDLTVEKLLPIKAYVLDPDSGLPKRDPKTGEEKVVTVFANQKGEPKKNTL ALLENIEAAKSRPFARFLNGLSIRHVGPVAAQALAREFRSIDRIEQASEQELASTDGVGP IIAAALKEWFAEDWHREIVRKWKAAGVPLEDASSTEDEGPRPLEGLTVVVTGTLEHFTRD GAKEALQTRGAKVTGSVSKKTSFVVVGDNPGSKYDKAMQLKVPVLDEDGFTVLLEQGPEA AAEVALPTEE NT seq 2193 nt NT seq  +upstreamnt  +downstreamnt gtggccggcgacaagcaagcggagacgacggtgcccgccgaggcacgggagaagcacgcg cagctcgctgagcagatcgaggagcaccgcttccggtactacgtgaaggacgctccggtc gtcagcgacgcggacttcgacaagctcctgcgttccctggaggccctggaggacgagtac ccggagttgcgcacgccggactcgccgacgcagaaggtcgccggcgcctacgagaccgag ttcacctccgtcgagcaccgctcgcgcatgctctccctcgacaacgcgttcaacgacgag gaactcgccgcctgggccgaccgcgtcgccaaggacgtcggcggctccgtctaccacctg ctgtgcgagctgaaggtcgacggcctcgccgtcaacctcacctacgagcacggccgcctc acccgcgcggcgacccgcggcgacggccggaccggcgaggacatcacgcccaacgtccgc acgatcgcggagatcccggaccgcctcgacggcgacgaggttcccaacctcgtggagatc cgcggcgaggtctacttcccgatggagaagttcctcgacctcaacgaacggctggtcgcc gccggtgacaagccgttcgccaacccccgcaacgcggcggccggttcgctgcgccagaag gacccgcgggtcaccgccggccgcccgctgcacatggtcgtccacggcatcggcgccctg gagggcttcgagggcatgaaccgcctctccgaggcgtacgacctgctcaagacctggggc ctgccgacctcccggcacaaccgggtcgtcgacggcctcgacggcgtacgggagttcatc gcctactacggcgagaaccggcactccgtggagcacgagatcgacggcgtcgtcgtcaag ctcgacgagatccgcctccagggccgcctgggctcgacggcccgcgccccgcgctgggcg atcgcctacaagtacgcgccggaagaggtcaacaccaagctcatcgacatcaaggtgggt gtcggccgcaccggtcgcgtcacgccctacgcccaggtggagccggtcaccgtcgcgggc agcgaggtcgagttcgccacgctgcacaaccaggacgtcgtcaaggccaagggggtgctc atcggcgacaccgtggtcatccgcaaggccggtgacgtcatcccggagatcctcgggccg gtcgtcgacctgcgggacggcagcgagcgggagttcgtgatgccgggcgagtgcccggag tgcggcacgccgctcaggcccatgaaggagggcgacatcgacctccgctgccccaacggg cgtacctgcccggcccagttgcgggagcgtgtctcctacctcgcgggccgcgagtgcctg gacatcgagcacttcggcgacgtggccgccgccgcgctcacccggccgctggagccggcc gacccgccgctcgtcgacgagggcgacctgttcgacctcaccgtcgagaagctgctgccc atcaaggcctacgtcctggacccggacagcggcctgcccaagcgggaccccaagaccggt gaggagaaggtcgtcacggtcttcgccaaccagaagggcgaaccgaagaagaacacgctg gcgctgctggagaacatcgaggcggccaagagccgtcccttcgcccggttcctcaacggc ctgtccatccgccacgtcggcccggtcgccgcacaggccctcgcccgcgagttccgctcc atcgaccggatcgaacaggcctccgaacaagagctggcgagcaccgacggcgtcggcccg atcatcgccgccgcgctcaaggagtggttcgccgaggactggcaccgggagatcgtccgc aagtggaaggccgccggagtcccgctggaggacgcctcgtccaccgaggacgagggcccc cgccccctggagggtctcaccgtcgtcgtcaccggcacgctggagcacttcacccgcgac ggcgccaaggaggcgttgcagacccgcggagcgaaagtcaccggttccgtctcgaagaag acgtccttcgtcgtcgtgggcgacaatcctggttcgaagtacgacaaggcgatgcagctc aaggtgcctgtgctcgacgaggacggcttcaccgtcctgctggaacaggggccggaggcg gcggccgaagtcgcgcttcctacagaggagtag

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