Stenotrophomonas cyclobalanopsidis: AB1723_04280
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Entry
AB1723_04280 CDS
T10607
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc01501
beta-Lactam resistance
scyc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB1723_04280
01503 Cationic antimicrobial peptide (CAMP) resistance
AB1723_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scyc03036
]
AB1723_04280
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyc02000
]
AB1723_04280
01504 Antimicrobial resistance genes [BR:
scyc01504
]
AB1723_04280
Chromosome and associated proteins [BR:
scyc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AB1723_04280
Transporters [BR:
scyc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AB1723_04280
Antimicrobial resistance genes [BR:
scyc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB1723_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
BSH_CusB
Beta-barrel_RND
CzcB_C
RND-MFP_C
Biotin_lipoyl
Beta-barrel_YknX
BSH_YknX
HH_MFP_RND
HH_YBHG
PTS_EIIA_1
DNA_pol_B_3
Motif
Other DBs
NCBI-ProteinID:
XCZ88369
LinkDB
All DBs
Position
879536..880696
Genome browser
AA seq
386 aa
AA seq
DB search
MSHPTFLPGRRTGLCAAALLISTSLLLGGCAAGPSADAKAAETKDEKKVDAVPVEVAVAS
HRAVAASYTGTAALEPRAESQVVAKTSGVALAVLVEEGQRVTAGQPLVRLDPDRARLAVA
QSEAQMRKLENNYQRAQKLVGQQMVSASDVDQLRYDLENMRAQYRLATLELSYTTVVAPI
SGVIASRSIKTGNFVQINTPIFRIVDNSQLEATLNVPERELATLRAGQPVVLSADALPGK
RFTGTVDRIAPVVDSGSGTFRVVSAFNGTEHALQPGMFGRIRIDYDQRADALVVPRLALL
DDGEPAVFRVREGKVARVPVKLGYAEGPWVEIREGLAAGDQIVTAGKVALRDGTAVQVIA
DPKTAKAKPATVAAKATPADKAGSQQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacccaaccttcctgcccggccgccgcacaggactctgtgccgctgccctgctg
atctccacctccctgctgctgggcggctgtgctgccggccccagcgccgatgccaaggcg
gctgaaaccaaggacgaaaagaaggtcgacgccgtgccggtggaagtggccgtggccagc
caccgcgccgtggccgccagctacaccggcaccgctgcactggaaccgcgcgccgaatcg
caggtggtggccaagacctccggcgtggccctggccgtgctggtcgaggagggccagcgg
gtcaccgccggccagccactggtgcgcctggacccggatcgcgcgcgcctggccgtggcg
cagagcgaggcgcagatgcgcaagctggaaaacaactaccagcgcgcacagaagctggtc
ggccagcagatggtcagtgcctccgacgtcgaccagctgcgctacgacctggaaaacatg
cgcgcgcagtaccgcctggccacgctggaactgtcctacaccacggtggtggcgccgatc
tccggggtgatcgcctcgcggtcgatcaagaccggcaacttcgtgcagatcaacacgccg
atcttccgcatcgtcgacaattcgcagctggaggccaccctcaacgtgcccgagcgcgaa
ctggccaccctgcgcgccggccagccggtcgtgctgtcggccgacgcactgccgggcaag
cgcttcaccggcacggtggaccgcatcgccccggtggtggattcgggcagcggcaccttc
cgcgtggtcagcgccttcaacggcaccgagcacgcactgcagccgggtatgttcgggcgc
atccgcatcgattacgaccagcgcgccgacgcccttgtggtgccgcgcctggcactgctc
gacgacggcgagccggccgtgttccgcgtgcgcgaaggcaaggtggcccgcgtgccggtc
aagctgggctatgccgaaggcccgtgggtggagatccgcgaaggtctggccgcgggtgac
cagatcgtcaccgccggcaaggtcgccctgcgcgacggcaccgccgtgcaggtcatcgcc
gatcccaagacggccaaggccaagccggccaccgtggccgccaaggccacgcctgcagac
aaggccgggagccagcaatga
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