Stenotrophomonas cyclobalanopsidis: AB1723_12085
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Entry
AB1723_12085 CDS
T10607
Symbol
smeD
Name
(GenBank) multidrug efflux RND transporter periplasmic adaptor subunit SmeD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc01501
beta-Lactam resistance
scyc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
Chromosome and associated proteins [BR:
scyc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AB1723_12085 (smeD)
Transporters [BR:
scyc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AB1723_12085 (smeD)
Antimicrobial resistance genes [BR:
scyc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB1723_12085 (smeD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCZ86294
LinkDB
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Position
complement(2630163..2631350)
Genome browser
AA seq
395 aa
AA seq
DB search
MHLTRIRPFLLSLVIAATVAACGGQPEQPQQGPGQVTVVTLKSESVGLTRELPGRTYAFL
VAEVRPQVSGIVAKRLFTEGGQVKEGQPLYQIEDASYRAQANSARAQLARAEATANAARL
SAKRITELAKVDAVSQQDLENAVAAQKQAEADVGAAKAALDAANVTLGYARITAPISGRI
GKSSVTQGALVSVGQADALATVQQLTPIYVDLTQSSAELLQLRRELAAGRLQDNQTLPVT
ILLEDGSEFPHKGALEFSEVSVDPTTGSYALRVKVDNPEGLLMPGMYVRAVIGGGVRADA
VLVPMQGIARDAKGDTSAMVVGKDNKVEVRPVKVSRALADKWLVEDGLQPGDKVIVEGLQ
KIGPGMPVQATEKGAAPAQPAAAPQSAAQPAGDAK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacccgaatccgccccttcctgctgtcgctggtcatcgccgcgacggtggcc
gcctgcggtggccaacccgaacagccccagcaaggccccggccaagtgaccgtggtcacg
ctgaagtcggaaagcgtgggcctgacccgcgaactgcctggccgtacctatgccttcctg
gtcgccgaagtgcgcccgcaggtcagcggcatcgtcgccaagcgcctgtttaccgagggc
ggacaggtgaaggaagggcagccgctgtaccagatcgaagacgccagctaccgcgcccaa
gccaacagcgcccgcgcccagctggcccgcgccgaagccaccgccaatgccgcgcgcctg
agcgccaagcgcatcaccgagctggccaaggtcgatgcggtcagccagcaggatctggag
aacgccgtggccgcgcagaagcaggccgaggccgatgtcggtgccgccaaggctgcgctg
gatgcggccaacgtcacccttggctacgcgcgcatcaccgcaccgatcagcggccgcatc
ggcaagtccagcgtcacccagggcgcactggtcagcgtcggccaggctgatgcactggcc
accgtgcagcagctcaccccgatctacgtcgacctgacccagtcctcggccgagctgctg
cagctgcgccgcgagctggccgccggccgcctgcaggacaaccagaccctgccggtcacc
atcctgctggaagacggcagcgagttcccgcacaagggcgcgctggagttctccgaagtg
agcgtggacccgaccaccggcagctacgcgctgcgggtgaaggtggacaaccccgagggc
ctgctgatgccgggcatgtacgtgcgcgcggtgatcggtggcggcgtgcgcgccgatgcc
gtgctggtgccgatgcagggcatcgcccgcgacgccaagggcgataccagcgccatggtg
gtcggcaaggacaacaaggtggaagtgcgcccggtgaaggtcagccgcgcactggccgac
aagtggctggtcgaggacggcctgcagccgggtgacaaggtcatcgtcgaaggcctgcag
aagatcggccccggcatgcccgtgcaggccaccgagaagggcgccgccccggcacagccg
gccgccgccccgcagtccgccgcccagccggccggcgacgcgaagtaa
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