Stenotrophomonas cyclobalanopsidis: AB1723_18650
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Entry
AB1723_18650 CDS
T10607
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00300
Lysine biosynthesis
scyc00550
Peptidoglycan biosynthesis
scyc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB1723_18650
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB1723_18650
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scyc01011
]
AB1723_18650
Enzymes [BR:
scyc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AB1723_18650
Peptidoglycan biosynthesis and degradation proteins [BR:
scyc01011
]
Precursor biosynthesis
Amino acid ligase
AB1723_18650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
XCZ87483
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Position
4108088..4109596
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AA seq
502 aa
AA seq
DB search
MSPSMLLSQLLPDVALAGNDPVLTGLVLDSRAVRPGNAFVAIAGFGAHGLGFVEQARAAG
ASAILFEPPAPAELPAPADAIAVPGLRARLGAMADQFHGAPSRAMTMVGVTGTNGKTSTV
QLLTQAWHLLGTPSGSIGTLGAGLYGAVEPTGFTTPLVLQMHALLAQLRNDGARAVAMEV
SSHALDQGRVDAVYYDVAVFTNLTRDHLDYHGDMASYGAAKARLFHRPGLKAAVVNLDDA
FGRELFAGLPASVQAIGLSSRGAAGASVRAEGLQLDGRGIGFELVIDGARAAVQSPLLGR
FNVDNLLAVAGSLHALGESVERIAGVLSALQPIRGRMNRLGGEDGLPTVVVDYAHTPDAL
EQALESLHGHLQGTLYCVFGCGGERDTGKRPQMAAIAERLANQVIVTDDNPRGEDGDVIV
ADILAGFADASAVTVQRSRARAIGLAVKRAGAGDIILIAGKGHEPYQEVKGVRHDFDDTE
VSAAALAAKAGVLSTQAGEGIA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttcgatgttgctttcgcagttgcttccggacgttgccctggcgggcaacgat
cccgttctgaccggcctggtgctggacagccgtgccgtgcggcccggcaatgccttcgtc
gccatcgccggtttcggcgcgcatggcctgggctttgtcgagcaggcgcgcgcggccggt
gccagcgccatcctgttcgaaccgccggccccggccgagctgccggcgccggccgatgcc
atcgccgtgccgggcttgcgcgcacgcctcggcgccatggccgaccagttccatggtgcg
ccctcgcgtgcgatgacgatggtgggcgtgaccggtaccaacggcaaaacctccaccgtg
cagctgctgacccaggcctggcacctcctcggtacgcccagtggcagtatcggcacgttg
ggcgccggactttatggtgcggtcgagccgaccggcttcaccaccccgctggtgctgcag
atgcatgcgctgctggcgcagctgcgcaacgacggcgcacgtgcggtggcgatggaagtc
agctcgcacgcgctggaccagggccgcgtggatgccgtgtactacgacgtggcggtgttc
accaacctcacccgcgatcacctggattaccacggtgacatggccagctatggcgcggcc
aaggcacgcctgttccaccgcccaggcctgaaggccgcagtggtgaacctggatgatgcg
ttcggtcgtgaactgttcgcaggcctgccggccagcgtgcaggccatcggcctgagctcg
cgcggtgccgccggtgccagcgtgcgtgccgaaggcctgcagctggatggccgcggcatc
ggcttcgaactggtcatcgacggcgcgcgcgctgcggtgcagtcgccgctgctgggccgc
ttcaacgtggacaacctgctggccgtggccggcagcctgcatgccctgggcgaatcggtc
gagcgcatcgccggcgtgctgtcggcactgcagccgatccgcggccgcatgaaccgcttg
ggcggcgaagacggcctgcccaccgtggtggtcgactacgcacatacccccgatgcgctg
gaacaggcccttgaaagcctgcacggccacctgcagggcacgctgtactgcgtgttcggc
tgcggtggcgagcgcgataccggcaagcgtccgcagatggccgccatcgccgagcgcctg
gccaaccaggtcatcgtcaccgacgacaacccgcgcggcgaagacggcgacgtgatcgtg
gctgacatcctcgctggattcgccgatgcctcggccgtgaccgtgcagcgcagccgcgcg
cgtgcgatcggcctggcggtgaagcgcgccggtgcgggcgacatcatcctgatcgccggc
aagggccacgagccctatcaggaagtgaagggcgtgcgccacgacttcgatgacaccgaa
gtgtcggctgccgcgctggccgccaaggctggtgtgctctcaacgcaggcaggggagggc
atcgcatga
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