Streptomyces cyanogenus: S1361_21650
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Entry
S1361_21650 CDS
T07416
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
scyg
Streptomyces cyanogenus
Pathway
scyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
S1361_21650 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_21650 (pdg)
Enzymes [BR:
scyg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
S1361_21650 (pdg)
DNA repair and recombination proteins [BR:
scyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
S1361_21650 (pdg)
Prokaryotic type
S1361_21650 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QTD99956
UniProt:
A0ABX7TTQ1
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All DBs
Position
4823367..4824218
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AA seq
283 aa
AA seq
DB search
MKKAAAVEKSAGKAAPVKKIAVRPPAGESPTALVRRARRVNRELAEVYPYAHPELDFENP
FQLLVATVLSAQTTDLRVNQTTPALFARYPTPEDLAAANPEEVEEILRPCGFFRAKTRSV
IGLSKALVENFGGEVPGKLEALVTLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWQ
WTDETDPDKIEAAVGALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGEG
ETDPEKARKLLKYEKGGFPGQRLKPPQAYLDAGGKPAPPLGAA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaggccgcggccgtcgagaagtccgccgggaaggccgcgcccgtcaagaagatc
gccgtcaggccgccggccggcgagtcccccaccgcgctggtccgccgcgcccgccgcgtc
aaccgcgagctggccgaggtctacccgtacgcccaccccgaactggacttcgagaacccc
ttccagctcctggtcgccaccgtgctgtcggcccagaccaccgacctgcgcgtcaaccag
accaccccggcgctcttcgccaggtaccccactcccgaggacctcgccgccgccaacccg
gaggaggtcgaggagatcctgcgcccctgcggcttcttccgggccaagaccaggtcggtc
ataggcctctccaaggcactcgtcgagaacttcggcggcgaggtgcccggaaagctggag
gcgctggtcacgctgcccggcgtcggccgcaagaccgccttcgtcgtcctcggcaacgcc
ttcggccggcccgggatcaccgtggacacccacttccagcggctggtccggcgctggcag
tggaccgacgagaccgaccccgacaagatcgaggccgccgtcggcgcgctcttcccgaag
agcgactggaccgacctgtcgcaccacgtgatctggcacggccgccgcatctgccacgcc
cgcaaacccgcctgcggcgcctgccccatcgccccgctctgcccggcctacggcgagggc
gagaccgacccggagaaggccaggaagctcctgaagtacgagaagggcggcttccccgga
cagcggctcaagcccccgcaggcctacctcgacgcgggcggcaaaccggcgccgccgctg
ggcgccgcgtga
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