Shewanella cyperi: JYB88_05035
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Entry
JYB88_05035 CDS
T07829
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_05035
01504 Antimicrobial resistance genes [BR:
scyp01504
]
JYB88_05035
Transporters [BR:
scyp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYB88_05035
Antimicrobial resistance genes [BR:
scyp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
JYB88_05035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF8102
Motif
Other DBs
NCBI-ProteinID:
QSX31010
UniProt:
A0A974XM86
LinkDB
All DBs
Position
1176696..1179857
Genome browser
AA seq
1053 aa
AA seq
DB search
MLSQFFIRRPIFAAVLSLLFFITGAIAVWQLPITEYPEVVPPTVVVTASYPGANPKVIAE
TVASPLEQEVNGVENMLYMSSQATADGRMTLTITFAIGTDVDRAQAQVQSRVDRAKPRLP
QEVQRLGVVTEKSSPDLTMVVHLTSPDKRYDMLYLSNYAALNVKDELARIKGVGSVQLFG
AGEYSLRIWLDPNKVQALGLSAGDVVAAVREQNQQAAAGSLGAQPSGSADFQLLINVKGR
LSELSEFEDIIIRVGQDGEIVRLKDVARVELGASSYALRSLLDNQDAVAIPIFQASGSNA
IQISDDVRARMAELSQGFPEGLNYEIVYDPTVFVRDSIKAVVKTLLEAILLVVLVVVLFL
QTWRASIIPLVAVPVSLVGTFAVMHLMGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN
IANGLSPMAATERAMREVTGPIVATTLVLAAVFIPTAFMSGLTGQFYKQFALTITISTFI
SAINSLTLSPALSALLLKGHDAPKDGLTRLMDRLFGTWLFAPFNRLFNRASAGYGFVVRK
VIRFGAIVGLLYLALVAATGVLFVKTPTGYVPGQDKQYLVAFAQLPDAASLARTDEVIKR
MSDIALDYPGVAHSVAFPGLSINGFTNSTNAGVVFVALDDFDKRQGPEQSAGAIAMALNQ
QFAAIQDAYIAIFPPPPVQGLGTIGGFRLQIQDRANLGYEALYQVAMQVMYKAWSTPELA
GVFSSYQVNVPQLELEVDRTKAKQQAVSLDQVFQTLQTYMGSTYVNDFNRFGRTYQVNMQ
ADEAFRQSPEQIRQLKLPNAHGDMVPLGSFIKVSQSAGPDRVMHYNGFVTAEINGGPAPG
YSSGEAQAAIEKILAETLPPGMTYEWTELTYQQILAGNAGLLIYPLVILLVFMVLAAQYE
SLSLPLAIILIIPMTLLSALSGVLLWGSDNNIFTQIGLIVLVGLATKNAILIVEFAKEKQ
DHGMAPMEAILEAARLRLRPILMTSIAFIMGVVPMVYSSGAGAEMRQAMGVAVFAGMIGV
TLFGLLLTPLFYYALNRRKARQAALAAVEAEAA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcacagttttttatcaggcgacccatattcgccgcagtgctgtcgctgctgttt
ttcatcaccggggccattgccgtctggcaactgcccatcacagaatatcccgaggtggtg
ccgccgaccgtggtggtcaccgccagctatcccggtgccaatcccaaggtgatcgccgaa
accgtggcctcgccactggagcaggaagtcaacggggtggagaacatgctgtacatgtcc
tcccaggccaccgccgatggccgcatgaccctgaccatcacctttgccattggcacggat
gtggaccgggcccaggcccaggtgcagagccgggtcgatcgcgccaagccgcgtttgccc
caggaagtgcaacgcctgggggtggtgaccgagaaatcgtcaccggacttgaccatggtg
gtgcacctgacctcaccggacaagcgctatgacatgctgtacctgtccaactacgccgcg
ctcaacgtcaaggatgagctggcgaggatcaagggcgttgggtcggtgcaactgtttggt
gccggtgaatacagcctgcgtatttggctcgatcccaacaaggtccaggccctgggcctg
tcggccggtgatgtggtggccgcggtgcgggagcaaaaccagcaggccgccgccggcagc
ctgggggcccagcccagcggcagcgccgacttccagttgctgatcaacgtcaagggccgt
ctcagcgagctgagcgaatttgaagacatcattatccgcgtcggtcaggatggtgagata
gtccgcctcaaagatgtggcccgggtagagctgggggcctccagctacgccctgcgctca
ctgctggacaaccaggatgcggtggccattcccatattccaggcctcaggctccaatgcc
atccagatttcagacgatgttcgtgcccgtatggccgaactgtcccagggtttccccgag
ggactcaattatgaaatcgtctacgatccgaccgtgtttgtgcgggattccatcaaggcc
gtggtcaaaaccctgctggaagccatcttgctggtggtgctggtggtggtgctgttcctg
cagacctggcgcgcgtccatcattcccctggtggccgtgcccgtatccctggtgggtacc
tttgcggtgatgcacctgatgggtttttcactcaatgccctgtcgctgtttggcctggtg
ctggccataggtattgtggtggatgacgccattgtggtggtggaaaacgttgagcgcaac
atagccaacggtctctcgcccatggccgccaccgagcgcgccatgcgtgaagtgacggga
cccattgtggccaccacactggtgctggctgcagtgtttattcccaccgcctttatgagt
ggcctgacggggcagttctacaagcagtttgccctgaccatcaccatctccacctttatc
tcggccatcaactccctgaccttgagtccggcgctgtcggcgctgctgctcaagggccat
gatgcgcccaaggacggcctgacccgcttgatggacaggctgttcggtacctggctgttt
gccccctttaaccgcttgttcaacagggcctcagccggctacggttttgtggtgcgcaag
gtgattcgtttcggcgccatagtgggcctgctgtatctggctttggtcgccgcaaccggg
gtgctgtttgtcaaaaccccaaccggctacgtgccggggcaggacaagcaatatctggtg
gcctttgcccagttgccggatgcggcctcgctggcccgcaccgatgaggtgatcaaacgc
atgtcggacatagccctggactatcccggtgtggcccattctgtggccttccccggtctg
tccatcaacggcttcaccaacagcaccaacgccggtgtggtgtttgtggccctggatgat
ttcgacaagcgccagggaccggagcagtccgccggtgccatcgccatggcgctgaaccag
cagtttgccgccattcaggatgcctatatcgccatcttcccgccaccacctgtgcaggga
ctcggcaccataggcggtttcaggctgcaaattcaggacagagccaacctgggctatgag
gccctgtatcaggtggcgatgcaggtgatgtacaaggcctggtctaccccagagctggcc
ggagtattctccagttatcaggtgaacgtgccgcagttggagctggaagtggacaggacc
aaggccaagcaacaggccgtgtcgctggatcaggtattccagacgctgcagacctacatg
ggctcgacctatgtgaatgacttcaaccgttttggtcgcacctatcaggtgaacatgcag
gccgatgaggccttccgccagagtcctgagcaaatccgccagctgaagttgcccaatgcc
catggcgacatggtaccgctcggctcctttatcaaggtgagccagagtgcggggccggac
cgggtgatgcactacaacggctttgtcaccgccgagatcaacggtggtccggcgccggga
tacagctcaggtgaggcccaggccgccattgagaagatcctggccgagactctgccaccc
ggcatgacctatgagtggaccgagctgacctaccagcagatcctggccggtaacgcgggc
ctgctgatctaccccctggtgatcctgctggtgttcatggtgctcgcggcccagtacgaa
agcctgagtttgccgctggccatcatactcatcatacctatgaccttgctgtcggcgctg
agtggggtgctgttgtggggcagtgacaacaacatcttcacccagataggcctgatagtg
ctggtggggctggcaaccaagaatgccatcctgattgtggagttcgccaaggagaagcag
gatcacggcatggcgcccatggaggccattctcgaggcggcgcggctgcgactaaggccg
atactgatgacctccatcgccttcatcatgggtgtggtgcccatggtgtactccagcggt
gccggcgccgagatgcgccaggccatgggcgtggctgtgttcgccggcatgataggtgtg
accctgtttggtctgctgctgacgccactgttctactatgcccttaatcgccgcaaggcc
agacaggccgccctggcagccgtggaggccgaggccgcgtaa
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