Shewanella cyperi: JYB88_07510
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Entry
JYB88_07510 CDS
T07829
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00270
Cysteine and methionine metabolism
scyp00450
Selenocompound metabolism
scyp01100
Metabolic pathways
scyp01110
Biosynthesis of secondary metabolites
scyp01230
Biosynthesis of amino acids
Module
scyp_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JYB88_07510
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JYB88_07510
Enzymes [BR:
scyp01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
JYB88_07510
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
LysM-like_PVC7
Baseplate_J_M_2
Motif
Other DBs
NCBI-ProteinID:
QSX31454
UniProt:
A0A974XN78
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All DBs
Position
complement(1752176..1753369)
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AA seq
397 aa
AA seq
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MSDKPMKTATKIVSLGRDKKYSMGVINPPVFRASTIVFDSMEQMRHAARHKHNGEMFYGR
RGTPTHFSFQAAIAELEGGVGTALYPSGAAAISAALLSFLKAGDHLLMVDSVYEPTRDLC
DKVLKGYGIETSYYDPLIGAGIAELIRPNTKVLFLESPGSITMEVQDVPTLARIAHEHGL
TVMLDNTWASPINCRPFEMGVDISIQAATKYIVGHSDVMMGTATANAGHWDQLREHSYLL
GQTTSPDDVYLAARGLRTLGIRLAQQDKNARTIADWLLTRPELDHLRHPAYPSCPGHEFF
ERDFSGGNGLFSFVLKDGSNAALEAFVEGMEHFKMGFSWGGYESLILAITGIDRIRSATR
WDSSKPLIRLHIGLEDPEDLIADLTAAFERYNAVMGR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaagcccatgaaaaccgccaccaaaatcgtcagtctcggccgcgacaaaaaa
tacagcatgggggtgattaacccccccgtgttccgcgcatctaccatagtcttcgattcc
atggagcagatgcgccacgcagccaggcacaaacataatggcgaaatgttttatggccgc
cgcggcaccccgacacacttcagtttccaggccgccattgccgagttggaaggcggcgtg
ggcacggccctgtatcccagtggcgccgccgccatcagtgccgccctgctctctttcctt
aaggccggggatcatctgctgatggtggacagcgtttatgaacccacccgggatctgtgc
gacaaggtgctcaagggctatggtatagaaaccagctattacgatcccctgataggtgca
ggcatagccgagcttatccgccccaataccaaggtgctgttcctggaatccccgggttcc
atcaccatggaagtgcaggatgtgcccaccctggcgcgcattgcccacgagcacggcctg
accgtgatgctggacaatacctgggcatcgcccatcaattgccggccgttcgagatgggg
gtggatatttccatccaggccgcaaccaagtacatagtgggtcattcggatgtgatgatg
ggcaccgccacggccaacgccggtcactgggatcagttgcgcgagcacagctacctgctg
ggccagaccacctcccccgatgatgtctatctggcggccagaggattgagaaccttaggg
atccgattggcacagcaggataaaaacgcccgcactattgccgactggttgctgacccgt
cccgagctcgaccacctgcgccacccggcctatcccagctgtcccggccatgaatttttc
gagcgggatttcagtggcggcaacggcctgttttccttcgtgctcaaggatggcagcaac
gcagcgctggaagcctttgtggaaggcatggagcattttaagatgggcttctcctggggc
ggctatgagagcctcatcctcgccatcacgggcatagacaggatccgcagcgccacccgt
tgggacagcagcaaacctttgatccgcctgcacataggcctggaagatcccgaagattta
attgccgatctgaccgcagccttcgagcgctataacgccgtcatgggccgctaa
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