KEGG   Shewanella cyperi: JYB88_08435
Entry
JYB88_08435       CDS       T07829                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
scyp  Shewanella cyperi
Pathway
scyp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    JYB88_08435 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scyp03400]
    JYB88_08435 (nth)
Enzymes [BR:scyp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     JYB88_08435 (nth)
DNA repair and recombination proteins [BR:scyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     JYB88_08435 (nth)
 Prokaryotic type
     JYB88_08435 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: QSX31626
UniProt: A0A974XNG4
LinkDB
Position
complement(1953466..1954107)
AA seq 213 aa
MNQQKRIEILTRLRANNPKPETELNFSSPYELLVAVTLSAQATDVSVNKATDKLFPVANT
PAAMVALGVEGLKEYIKTIGLFNNKAINVVALSQILLDKHGGEVPEDREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRMANRTKFAPGKNVVEVEQRMLKVVPVEFKVDVHHWFI
LHGRYTCLARKPRCGSCIIEDLCEFKDKVYPEE
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaaccagcaaaagcgaattgaaattctgacccgcctgcgggccaacaatcccaagccg
gaaaccgagctcaacttttccagcccctatgagttgctggttgccgtaaccctctcggcc
caggccacggacgtcagcgtcaacaaggccaccgacaagctgtttcccgtggccaatacc
ccggcggccatggtggcgctcggtgttgaagggctcaaggaatacatcaagaccataggc
ctgtttaacaacaaggccatcaatgtggtggccctgtcgcaaattctgctggataaacat
ggcggcgaagttcccgaagacagggaagcgctggaagccctgcccggtgtgggccgcaaa
accgccaacgtggtgctcaacaccgcctttggctggccgacaattgccgtcgacacccat
atcttccgcatggccaaccgcactaaatttgctccgggtaaaaacgtggtggaagtggaa
cagcgaatgctgaaggtggtaccggtggaattcaaggtggatgtacaccactggtttatt
ctgcacggccgctacacctgcctggcgcgcaaaccccgctgcggcagttgcatcatagaa
gatctgtgtgaattcaaggacaaggtttaccctgaggaataa

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