Shewanella cyperi: JYB88_09905
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Entry
JYB88_09905 CDS
T07829
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
scyp
Shewanella cyperi
Pathway
scyp00220
Arginine biosynthesis
scyp00250
Alanine, aspartate and glutamate metabolism
scyp00430
Taurine and hypotaurine metabolism
scyp00910
Nitrogen metabolism
scyp01100
Metabolic pathways
scyp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
JYB88_09905
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JYB88_09905
00220 Arginine biosynthesis
JYB88_09905
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
JYB88_09905
Enzymes [BR:
scyp01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
JYB88_09905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
QSX28605
UniProt:
A0A975AJ13
LinkDB
All DBs
Position
complement(2279140..2283984)
Genome browser
AA seq
1614 aa
AA seq
DB search
MALKDAMPSVLLENVVSLIHSKVPNSQAKQVEQFATCLYTHMSKDDLQARNDSDLYGAVL
SLWNALNKTLIGDTHIRVFNPSQSKHGWQSAHTIIEVIQPDMPFLVDSLSMALNRMGVTA
HMMLHTPLAISRSGSDVTAVSHVNNSPADSDKVAVFLIEIDRQSSETDLKLLLKEMQSVL
GDVAASVNDWQAMSDKLAETIKELPNRPFPGSKQDMEEAIAFLTYLNNHHFTLLGYRQYD
LKRIEGDMELVPNLETGLGLMNKPGKVHSDKALKLSTLSDSARKEALDESLLILTKSSSK
SRVHRPAYVDYIGIKRFDKQGNVVGEDRFIGLYASNVYNRSPREIPLLAEKVQRVLDNSG
LVPRSHDYKALVNILENLPRDELIQGSVEELAHVAHGVLEMQDRDKLKLFVRKDGFGRFL
SCLVYVSKDRYNTKLRQDTQRILAKHFNSQDEVEFTTYFSESSLARTHYIVKVDNNNMEV
DVAAIENNLIEAARSWEDKLYSALNHSQGEEAGNHLSKRYLTAFPRSYKEDVLPSAAVVD
IQQLESLNEEHKLGMLFYQPQEAALNSNKVRLKLFHKDEPIHLSDVLPMLENFGLRVINE
RPYEVKTPDGATFWILDFLMMVTGGSTENLADSQDRFQSALAQVWNKQLEDDGFNRIVLA
TGLSGREVSILRAYAKYMRQIDATFSQAYIEQTFARYPQIADLLVKMFIRKFNPKLKTRT
LDKFLEQLNLRLEEVASLDDDRIIRRYLDLIKATVRTNFYQTKADGESKDYISFKYIPSL
IPEMPKPLPKFEIFVYSPRVEGVHLRGGKVARGGLRWSDRREDFRTEVLGLVKAQNVKNT
VIVPVGAKGGFVCKQMPVDASREAVFTEGQECYRIFIRGLLDITDNIINGAIVPPADVVR
HDEDDPYLVVAADKGTATFSDIANAISIEYNHWLGDAFASGGSNGYDHKKMGITAKGGWE
SVKRHFREIGIDCQTTDFTCLGIGDMAGDVFGNGMLLSEHTCLVAAFNHMHIFIDPNPDA
AATFKERERLFNLPRSSWDDYNRELISKGGGIFLRSAKSITLSPEMKQMLGTDKASMNPT
ELLKELLKMEVDLIWNGGIGTYVKSSRETNAEVGDRANDGLRVNGRDVRAKIIGEGGNLG
CTQLGRIEYAMNGGRMNTDFVDNVGGVDCSDNEVNIKILLNAMVAEGEMTLKQRNRLLEE
MTGEVSDIVLQDCKDQTRTISVTQVRGAEQLKEQIRFIHYLEKEGKLDRALEFLPNDDEL
AERLANGRPLTRPELSVLVAYAKMVLKEQLVTAEITEDEFLSKMLISYFPKKLQEQFADK
MTSHPLRGEIIATSLANELVNDMGLNFVQRMQDETGASVAEAAICYTMAREVFGLADLTK
AITDLNGIVPAVVQLEMLHQLRRNMRRACRWFLRHRNRTMNIQQTVAFFKPVFDELRADV
HNYMVEEEVVGIQAETDALIKEQVPESVARLVAYMSTLFSALDIAQIAQNESKPVALVAE
AYFKLGAKVELHWFLEQISAQPVGNHWQALARAAFREELDWQQRALSSVVLRTCSETCDA
DTIITQWIDTNRSLLERWFHMLADFKTSQSHEFAKFSVALRELNLMILHCEGHQ
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaagatgcaatgccttcagtactacttgaaaacgtagtcagtttgattcac
tccaaagtccctaattcacaagcaaagcaagtcgaacagttcgccacctgcctttacacc
cacatgtcgaaagatgacctgcaggcccgtaacgacagtgatctctacggtgccgttctg
agtctgtggaacgccctcaacaagaccctgatcggcgacacccatatccgggtattcaac
ccgagccaatccaaacatggctggcaatccgcccataccatcatcgaagttattcaacca
gacatgcctttcttggttgattccctgagtatggccctgaaccgcatgggtgtgactgcc
catatgatgctgcacacgccactggccatcagccgcagcggtagtgacgtgaccgcagtg
agtcatgtgaacaacagccccgccgacagcgataaggtcgcggtatttttgattgaaatc
gaccgtcaaagcagtgagaccgatctcaagctgctgctgaaagaaatgcagtcggttttg
ggggatgtggccgcgtcggtgaacgactggcaagccatgtcagacaagttggccgagacc
atcaaggaactgccaaaccgtcctttccccggcagcaagcaggatatggaagaagccatt
gccttcctgacttacctgaataaccaccatttcaccctgctgggttatcgtcaatatgac
ctcaagcgcatcgaaggtgacatggaattggtgcccaacctggaaacgggtcttggcctg
atgaataagccaggcaaggtccacagcgacaaggcgctcaaactctctaccctgtcggac
agtgcccgtaaggaagcactggacgaatctctgttgatcctgaccaagagcagcagcaag
agccgggtacacagacctgcctatgtcgattacatcggcatcaagcgttttgataagcaa
ggcaacgtggtgggtgaagacagattcatcggcctgtacgcctccaacgtgtacaaccgc
agcccaagggaaatcccgctgctggccgagaaggtacagcgcgtgctggacaactcaggt
ctggtaccccgttcacacgactacaaggcgctggtgaacattcttgaaaacctgccacgt
gatgagctaatccagggcagtgttgaagaattggcccatgtggcccacggcgtgctggaa
atgcaggacagggacaagctcaagctgttcgtgcgcaaagacggtttcggccgtttcctg
tcatgtctggtctacgtttccaaagacagatacaacaccaagctgcgtcaggatacccaa
cgcattctggccaagcatttcaacagccaggacgaagtggaattcaccacttatttctct
gaatccagcctggccagaacccactacatagtcaaagtcgataataacaatatggaagta
gatgtggccgccattgaaaataacctgattgaagccgcccgcagctgggaagacaaactt
tacagcgcgcttaaccacagccagggtgaggaggcaggcaatcacctgtccaagcgctac
ctgaccgcgttcccccgttcttacaaagaagacgtgctgccaagtgccgccgtggtggat
attcagcagctggaatcactgaacgaagaacacaagctcggcatgttgttctaccagcca
caggaagccgcgctgaacagcaacaaggtgcgcctgaagctgttccacaaggacgagcct
atccatctgtccgatgtattgcccatgctggaaaacttcggcctgcgcgtcatcaacgag
cgcccctacgaggtcaagacccccgatggtgccactttctggatcctcgacttcctgatg
atggtcacaggtggcagcaccgaaaacctggccgacagtcaggacaggttccaaagtgct
ctggcccaggtgtggaacaagcaactggaagatgacggcttcaaccgtatcgtgctggcc
accggcctgagcggtcgtgaagtgtccatcctgcgtgcctatgccaagtacatgcgtcaa
atcgacgccaccttcagccaggcttacattgagcagacttttgcccgctatccacagatt
gccgatctgctggtgaagatgttcatccgcaaattcaatcccaagctgaagacccgcacc
ctggacaagttcctggagcagctgaacctgcgcctggaagaagtggcgagcctggatgac
gaccgcatcattcgccgttacctggatctgatcaaggccacagtgcgtaccaacttctac
cagaccaaggccgatggtgagtcgaaggattatatctccttcaagtacatccccagcctg
atccccgagatgcccaagccgctgccgaagtttgaaatcttcgtctacagcccaagggtt
gagggtgtgcatctgcgcggtggtaaggtggcccgtggtggtctgcgctggtcagacaga
cgcgaagacttccgtaccgaggtactgggtctggtgaaagcccaaaacgtgaagaacacg
gttatcgtgcccgtgggcgccaagggtggtttcgtctgcaaacaaatgccggtcgatgcc
agccgtgaagccgtgttcactgaaggtcaggaatgctaccgcatctttatccgtggtctg
ctggatatcacagacaacatcatcaacggtgccatagtgccacctgccgatgtagtccgt
catgacgaagacgatccatacctggtggtggctgccgacaagggcactgcgaccttctcg
gatatcgccaacgccatctccatcgaatacaaccattggttgggtgacgccttcgcatca
ggtggttcaaacggttacgatcacaagaagatgggtatcacagccaaaggtggttgggaa
tccgttaagcgtcacttccgcgaaatcggtatcgattgccaaaccacagacttcacctgt
ctgggtataggtgacatggccggtgacgtattcggtaacggcatgttgttgtccgagcac
acctgtctggtggcggcgttcaaccacatgcacatctttatcgacccgaatccggatgcg
gctgccaccttcaaggaacgtgagcgtctgttcaacctgccacgctccagctgggacgac
tacaaccgcgagctgatctccaagggcggcggtatcttcctgcgcagcgccaagtccatc
accctgagcccagagatgaagcaaatgctgggtacggacaaggcttccatgaacccaacc
gagctgctcaaagagctgctgaagatggaagtggacctgatctggaacggtggtatcggt
acctacgttaagtcttcccgcgaaaccaacgccgaagtgggcgatcgtgccaacgacggt
ctgcgtgtcaacggccgtgatgtacgcgccaagatcataggcgagggcggtaacctgggt
tgtacccagttgggccgtatcgaatacgccatgaacggcggccgcatgaacaccgacttc
gttgacaacgtgggtggtgtggactgctctgacaacgaagtgaacatcaagatcctgctg
aacgccatggtggccgaaggcgagatgaccctcaagcagcgtaaccgtctgctggaggag
atgaccggcgaagtcagtgacatagtgctgcaggactgtaaggatcaaacccgtaccatc
tccgtgacccaggtgcgtggtgccgagcagctcaaggaacagatccgcttcatccattac
ctggagaaggaaggcaagctggaccgtgcactggaattcctgccaaacgacgacgaactg
gccgagcgcctggccaatggccgtccgctgacccgtcccgagctgtctgtgctggtggcc
tacgccaagatggtgctgaaagagcagctggttaccgctgagatcaccgaggatgaattc
ctgtcgaagatgctgatctcctacttccccaagaagttgcaggagcagtttgccgacaag
atgaccagccacccgctgcgcggcgagatcattgccacttcactggccaacgagctggtg
aacgacatgggtctgaactttgtgcaacgcatgcaggatgagaccggcgccagcgtggcc
gaagcggccatctgctataccatggcccgcgaggtctttggtctggctgacttgaccaag
gcgatcaccgatctcaacggtatagtgccagccgtggtgcaactggaaatgctgcatcag
ctgcgtcgcaacatgcgccgtgcctgccgctggttcctgcgtcatcgcaaccgcaccatg
aacatccaacaaaccgtggccttcttcaagccagtgttcgacgagctgcgtgccgacgtt
cacaactacatggtggaagaggaagtggttggtattcaggccgaaaccgatgcactgatc
aaggaacaggttcctgagtctgtggctcgcctggtggcttacatgagcaccctgttctcg
gctctggacatagcccagattgcccaaaatgaaagcaagcctgtggccctggtggccgag
gcttacttcaagctgggtgccaaggttgaactgcactggttcctggagcagatcagcgcc
cagcctgtgggcaaccactggcaagcgctggcccgtgccgccttccgcgaagagctggat
tggcagcaacgtgcactcagctcagtggtactgcgtacctgcagcgaaacctgtgatgcc
gataccatcatcacccagtggatcgacaccaatcgctcactgctggagcgttggttccac
atgctggccgacttcaagacatcgcaaagccatgagtttgcgaagttctctgttgccctg
cgtgaactgaacctgatgatcctgcactgcgaaggtcatcagtaa
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