Shewanella cyperi: JYB88_11275
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Entry
JYB88_11275 CDS
T07829
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scyp
Shewanella cyperi
Pathway
scyp01501
beta-Lactam resistance
scyp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYB88_11275
01503 Cationic antimicrobial peptide (CAMP) resistance
JYB88_11275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scyp03036
]
JYB88_11275
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_11275
01504 Antimicrobial resistance genes [BR:
scyp01504
]
JYB88_11275
Chromosome and associated proteins [BR:
scyp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JYB88_11275
Transporters [BR:
scyp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JYB88_11275
Antimicrobial resistance genes [BR:
scyp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JYB88_11275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
DUF6599
Motif
Other DBs
NCBI-ProteinID:
QSX28851
UniProt:
A0A974XI68
LinkDB
All DBs
Position
2613546..2614586
Genome browser
AA seq
346 aa
AA seq
DB search
MKANSLLLTLLAQSTLTLGAWTLSALPTSMAAYAAEPQTQVLKAEVHPQYLTLDAVIEPV
RAATVSAQTSGRIIKLNFDVNDKVPAGAALLEITSKEQGAGLEAAEAELAKAQAVNIEAQ
AQLKRVSELFPKGAVSRNSMDEAIARARSTEQAVTAAKAGLTRARESLNYTVVYAPFGGV
LTARHVEVGETVNPGQPLLSGYGSEAMRAVFSLPQQWISAFRGNAKVELQLADGSKIDSD
RIELFDFASAGGHSQRVRVALPEHAAVTPGSWAKVRFIKEMRSQLRIPKSALIVRNELNA
VYLKQADTFVLTQVRLGQEQGDELTVLSGLAEGDEIALNAHQVTAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctaattcactcttgctgaccctgctggcacaaagcaccttaaccctgggtgcc
tggaccctgagcgcattgcccacaagtatggctgcctacgcggccgaacctcaaactcag
gtcctgaaggccgaggtgcacccccagtacctgacactggatgcggtcatcgagccggtg
cgcgctgcaaccgtgtcggcgcaaacttcgggacggatcatcaaactcaatttcgatgtc
aatgacaaggttccggccggcgctgccctgctggaaatcaccagcaaggaacagggcgcg
ggcctcgaggccgccgaagccgagcttgccaaggcacaggcggtgaatattgaggcccag
gcccagcttaaacgagtcagcgaactctttcccaagggcgcggtatcgcgcaattccatg
gatgaagccatcgcccgtgcccgcagcacagaacaagccgtgacggccgccaaggccggt
ctgacccgggccagggaatcactcaattacactgtggtgtacgccccctttggcggtgtc
ctgacggcgcgccatgtggaagtcggtgaaaccgtcaatcccggtcagccattgctgtcc
ggttatggcagtgaagcgatgcgcgccgtgttcagcctgccgcagcaatggatcagcgcc
tttcgcggcaatgccaaggtggaactgcaattggccgatggcagcaagatagacagtgac
cgcatcgaactgttcgactttgcctccgccggtggtcacagccaaagagtgcgggtcgcg
ttgcccgagcatgccgccgtgacgcccggctcctgggccaaggtgcgctttatcaaggaa
atgcgctcacagctgcggatccccaaaagtgccctgatagtgcgcaacgaactcaatgcc
gtctacctcaaacaggccgacacttttgtgctgactcaggtacgcctgggtcaagagcaa
ggtgatgagctgaccgtgctttcaggacttgcagaaggggacgaaatcgccctcaatgca
caccaggttacggccaggtaa
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