Shewanella cyperi: JYB88_14230
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Entry
JYB88_14230 CDS
T07829
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
JYB88_14230 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyp03000
]
JYB88_14230 (dksA)
03021 Transcription machinery [BR:
scyp03021
]
JYB88_14230 (dksA)
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_14230 (dksA)
Transcription factors [BR:
scyp03000
]
Prokaryotic type
Other transcription factors
Others
JYB88_14230 (dksA)
Transcription machinery [BR:
scyp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
JYB88_14230 (dksA)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA transcription factors
JYB88_14230 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
DUF7342
DZR
Motif
Other DBs
NCBI-ProteinID:
QSX29354
UniProt:
A0A974XJB7
LinkDB
All DBs
Position
3235259..3235702
Genome browser
AA seq
147 aa
AA seq
DB search
MPEGTKKLGVLAIAGVEPYQEKPGEEYMNDLQMGHFKKILEAWRNQLREEVDRTLSHMQD
EAANFPDPVDRAAQEEEFSLELRARDRERKLIKKIEKTLQKIEEDDFGFCDSCGVEIGIR
RLEARPTADLCIDCKTLAEIKEKQMAG
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcactaaaaaacttggcgtactcgctatcgcaggtgtagaaccctaccag
gaaaagcctggtgaagagtatatgaacgacctgcagatgggccacttcaagaagatcctt
gaagcctggcgcaaccaactgcgcgaagaggtggatcgcaccctcagccacatgcaggac
gaagccgccaacttccccgatcccgtcgatcgtgctgcccaggaagaagaattcagtctg
gaattgcgtgcccgtgaccgtgagcgcaagctgatcaagaagattgaaaagacgctgcaa
aagatcgaagaagatgattttggtttctgcgattcctgtggcgtggaaatcggtatccgc
cgcctggaagcccgtccaacggccgatctctgcatcgattgcaagacactggccgagatc
aaagaaaagcagatggccggttaa
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