Shewanella cyperi: JYB88_17960
Help
Entry
JYB88_17960 CDS
T07829
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scyp
Shewanella cyperi
Pathway
scyp01501
beta-Lactam resistance
scyp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYB88_17960
01503 Cationic antimicrobial peptide (CAMP) resistance
JYB88_17960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scyp03036
]
JYB88_17960
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_17960
01504 Antimicrobial resistance genes [BR:
scyp01504
]
JYB88_17960
Chromosome and associated proteins [BR:
scyp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JYB88_17960
Transporters [BR:
scyp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JYB88_17960
Antimicrobial resistance genes [BR:
scyp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JYB88_17960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
OEP
Motif
Other DBs
NCBI-ProteinID:
QSX30034
UniProt:
A0A974XKF4
LinkDB
All DBs
Position
4047204..4048352
Genome browser
AA seq
382 aa
AA seq
DB search
MRQLFGIASAISMALLISACDNKAEQGTPQGQTPPPTAVGVVQVQSGPQTLTTELPGRSR
AHLEAEVRPQVSGIITERNFTEGGLVSKGQSLYKIDDASFLAALQSAEADLASAKAGLVS
AKARAARYQALLSSKAISKQDFDEADASFKEAQARVAQAEAAVNNAKINLDYTQVRAPIA
GRIGKSSVTAGALVTANQSMTLATIQQLDPINVDISQSSAQLLALKAKLRQGQLQASDHA
EVELVLEDGSLYEHKGKLKFAEVNVEETTGSVILRAEFPNPDQLLLPGMYVRARLNMGTD
PAAILVPQKAISRNTKGQAVAMVVNKDNQVEARVVTTAEVINNQWRITSGLQDGDQLIIE
GLQKIRPGAPVSATPATTSPAH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaactgtttggaattgcctcggccatcagcatggccttgttgatcagcgcctgt
gacaacaaggcagaacaaggcacaccccagggacaaacacccccaccgacggccgtgggc
gtggtgcaggtgcaaagtgggccccaaaccctaacgaccgagctgccgggccgcagccgt
gcccatctggaagccgaggttcgcccccaggtatcgggcatcatcaccgaacgcaacttc
accgagggaggcctggtcagcaagggccagtccctgtacaagattgacgatgccagcttc
ctggccgcattgcagagtgccgaagccgatctggccagcgccaaggcggggctcgtcagc
gccaaggccagagcggcccgttatcaggcgctgctcagcagcaaagccatcagcaaacag
gacttcgatgaggccgatgcttctttcaaggaagcccaggcccgggtggctcaggcggaa
gccgcggtcaacaatgccaaaatcaatctggactacacccaggtgcgcgcccccattgcc
ggccgcatcggcaagtccagcgtcaccgccggcgctctggtgaccgccaatcagtccatg
accctggccaccatacaacagctggatcccattaacgtcgacatcagccaatccagcgcc
cagctgctggcactcaaggccaagctgcgccagggccagttgcaggccagcgaccatgcc
gaggttgaactggtgctggaagacggcagcctgtacgagcacaagggcaagctgaagttt
gccgaagtcaacgttgaagagaccacgggctcggtgatcctgagggcggaattccccaac
ccggatcaactgttgctgcccggcatgtatgtgcgtgcccggcttaacatgggcacggat
cctgcggccattctggtgccgcaaaaggccatttcccgcaacaccaagggccaggccgtg
gccatggtggtcaacaaggacaaccaggttgaggccagggtggtcaccacagccgaggtg
ataaacaaccagtggcgcatcacgtccggactgcaggatggtgatcagctgatcatcgag
ggcctgcagaagataagacccggcgcgcccgtcagcgccacaccggccaccaccagccca
gcgcactaa
DBGET
integrated database retrieval system
