Scytonema sp. NIES-4073: NIES4073_06050 Help Entry NIES4073_06050    CDS       T10147                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism scys  Scytonema sp. NIES-4073 Pathway scys03030   DNA replication scys03410   Base excision repair scys03420   Nucleotide excision repair scys03430   Mismatch repair Brite KEGG Orthology (KO) [BR:scys00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     NIES4073_06050    03410 Base excision repair     NIES4073_06050    03420 Nucleotide excision repair     NIES4073_06050    03430 Mismatch repair     NIES4073_06050  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:scys03032]     NIES4073_06050    03400 DNA repair and recombination proteins [BR:scys03400]     NIES4073_06050 Enzymes [BR:scys01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      NIES4073_06050 DNA replication proteins [BR:scys03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      NIES4073_06050 DNA repair and recombination proteins [BR:scys03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      NIES4073_06050    NER (nucleotide excision repair)     GGR (global genome repair) factors      NIES4073_06050    MMR (mismatch excision repair)     DNA ligase      NIES4073_06050   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       NIES4073_06050 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia BRCT_2 PTCB-BRCT HHH RNA_pol_A_CTD DUF4796_N Motif Other DBs NCBI-ProteinID:  BAZ19732 LinkDB All DBs Position 250482..252545 Genome browser AA seq 687 aa AA seqDB search MEMNLVQATNTEAKQRVQELRQLLQKASYAYYVLDSPIMEDAVYDQLYRELQQLENQYPE LVTPDSPTQRVGERPATQFISVRHNIPLYSLENAFNIEELKAWEQRWRRQAPNVGEVEYV CELKIDGSALALTYENGVLVRGATRGDGVMGEDITQNVRTIRSIPLRLNVETLDANSLPE RVEVRGEAFLPLEVFKQINEERQKAGEAVFANPRNAAAGTLRQLDSKIVARRRLDFFAYT LHIPGLDDASIANTQWEALELLQKMGFRVNPNHKLCPSLQDVAQYYEYWDTERLNLPYMT DGVVVKLNSFKLQEQLGFTQKFPRWAIALKYAAEEAPTRVENIAVNVGRTGALTPLAEMR PVQLAGTTVSRATLHNADRVAQLDIRIGDTVIVRKAGEIIPEVVQVLKELRPDHTNPFVM PSQCPVCGQPVVREMGEAVTRCVNASCPAILKGAIEHWVSRDALDIKGMGEKLVHQLVDR GVVHSVADLYDLTEDNLYALERMGKKSAQKLVEAIAQSKNQPWSRVLYGLGIRHVGSVNA QLLTQKFPIVEQLAQATQADIETVHGIGEEIAQSVHQWFRISANQTLISRLQDAGLQFAS AVEETSVSQSQQKLAGKTFVITGTLPTLKRDEAKALIQKAGGKVTDSVSKKTDYLVTGED AGSKLVKAQELGVSQLSEEQLLEMLQD NT seq 2064 nt NT seq  +upstreamnt  +downstreamnt atggagatgaatttggtgcaagcgacaaacacagaagccaaacagcgtgttcaagaactg agacaactactacaaaaagctagctacgcctactacgtcctcgattcacccattatggag gacgcagtgtatgaccagctgtatcgagaattgcaacagctggaaaatcagtatccagaa ttagtgacacctgatagcccgactcaacgggtgggagaaaggccagcaacccaatttatc tcggtacgtcataatattccactatatagtttagaaaatgcgtttaacattgaagaatta aaagcatgggagcaacgttggcggcgacaagcaccgaacgttggtgaagtggagtatgtc tgcgagttgaaaattgatggttctgccttagcactgacatatgaaaacggtgttctcgta agaggtgcaaccagaggtgatggagttatgggtgaagacatcacccaaaatgtgcggaca attcgctcaattcccttgcggttaaatgtagagacgttggatgcaaactctctcccagag agggtagaggtgcggggtgaggcgtttttgcccttggaagtgtttaaacaaattaatgag gaaaggcaaaaagcaggtgaagcagtttttgccaatcctcgaaacgctgcagcgggaacc cttagacaactggactccaaaattgtcgcccgacggcggttagatttctttgcttacacg ctgcacattccagggttggatgatgctagtattgctaatactcagtgggaagcgctggaa ctgttacaaaagatgggatttcgcgtcaaccctaaccacaaactgtgtccttctctacaa gatgttgcccagtattacgaatactgggacacggaaagattgaatttgccctacatgaca gatggggtggtggtgaagctgaattcttttaagcttcaggaacagctggggtttacgcaa aagtttcctcgttgggcgatcgccctgaagtatgcagcagaagaagcacccacgcgcgtg gaaaatattgctgtgaacgtcggaagaacgggggcgctgactccgcttgcagaaatgcgt ccggtgcaactggcgggaacaacggtttcccgtgctactttacataatgctgaccgcgtt gctcaattagatatccgcattggcgatacagttattgttcgcaaagctggggaaattatt ccagaagtggtgcaggtacttaaagaactccgtcctgatcataccaacccctttgtcatg ccctcccagtgtccggtttgcggtcaacctgtggttagggagatgggggaggcggtgact cgctgcgtcaatgcttcttgtccagctattcttaagggagcgatcgaacattgggtgagt cgcgatgctttggatatcaagggtatgggcgaaaagctggtgcatcaacttgtagataga ggagtggtgcattctgttgccgatttatacgacttgacagaagataatttgtatgcgtta gaacgaatggggaaaaagtcggcacagaagttggtggaggcgatcgcccaatcgaaaaac caaccgtggtcacgggtgttgtatggtttgggtattcgtcacgttggtagcgtcaatgct caattgttgacacagaagtttcccatagtcgaacagttggcgcaagcaacgcaagctgat atagaaactgttcacggtatcggtgaggaaattgcccaatctgtacaccagtggttccgt attagtgcgaatcaaactttgatttctcgcttgcaagatgctgggttgcaatttgcgagt gcagtggaagaaacatcggtgagtcagagtcagcaaaagttggctggtaaaacttttgtg attactggtacacttcctacgttgaagcgggatgaagcaaaggcgttgattcaaaaagct ggtggtaaggtgacggattctgtgagtaagaaaacagattatttggttacaggcgaagat gctggttctaagttggtaaaggcgcaagagttaggtgtttcgcagttgagtgaagaacag ttgttggagatgttgcaggattaa

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