Kalymmatonema gypsitolerans: NIES4073_52640
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Entry
NIES4073_52640 CDS
T10147
Name
(GenBank) peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys00550
Peptidoglycan biosynthesis
scys01100
Metabolic pathways
scys01502
Vancomycin resistance
scys02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIES4073_52640
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIES4073_52640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NIES4073_52640
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scys01002
]
NIES4073_52640
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scys01011
]
NIES4073_52640
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
scys01504
]
NIES4073_52640
Enzymes [BR:
scys01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
NIES4073_52640
Peptidases and inhibitors [BR:
scys01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
NIES4073_52640
Peptidoglycan biosynthesis and degradation proteins [BR:
scys01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
NIES4073_52640
Antimicrobial resistance genes [BR:
scys01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
NIES4073_52640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF6463
Insulin_TMD
Motif
Other DBs
NCBI-ProteinID:
BAZ24369
LinkDB
All DBs
Position
complement(5780321..5781145)
Genome browser
AA seq
274 aa
AA seq
DB search
MDNAGFSEKPQDTPSTSGEDIPEALRDTPDAAPKVSIRPLLLIIGGVVGVVLIAVVSGFL
FFVVAPKKAKDSQPSPLSSTPATPSKAGNSATSKDNIVLGHFSYTEAPESELQPISNDRR
IKMRKAAAQKFVEMVAAARSAGVVLVPISGFRSIKDQEQLFFTVGAQRNQTPAQRAAVSA
PPGHSEHHTGYAVDIGDAAARATDLNPNFEKTKAYQWLEANAARFGFEMSFPKDNVQGVS
YEPWHWRFVGDRDSLETFYKAKNLKPAQIQSTPQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttggataatgctgggttttctgaaaaaccgcaagatacaccatctacttctggtgaagat
attccggaagctttacgcgatactcctgatgcagcccctaaagtaagcattcgcccgttg
cttttgataattgggggagttgtgggagttgtcttgatagccgttgtcagtggttttttg
tttttcgtagtcgcacccaaaaaagcaaaagattctcagccttcgcctcttagttcaact
cctgcaactccatcaaaagcgggtaattcagccacatcgaaggataatatagttttgggg
catttttcctacacagaagcccctgagtcagaattacagccaatttctaatgataggcgc
atcaaaatgcgaaaagccgcagcgcagaagtttgtagaaatggtagcagcagcgcggagt
gcgggagtcgttttggtgcctatttccggttttcgctctataaaagaccaagaacagtta
ttttttaccgttggtgcccagcggaatcagacaccagcacaacgggctgctgtcagcgct
ccccccggtcacagtgaacatcatacaggttatgctgtggatattggggatgcagcagca
cgagcaaccgatctgaatccaaactttgaaaaaactaaggcttatcaatggttagaggca
aatgcagcccgtttcgggtttgagatgtcctttcccaaagacaatgttcaaggggtgagt
tatgaaccttggcactggcgttttgtgggcgatcgcgatagcttagaaactttttacaaa
gctaaaaatttgaaacctgctcaaatccaatcaactcctcagtag
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