Scytonema sp. HK-05: SAMD_20850
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Entry
SAMD_20850 CDS
T09974
Name
(GenBank) transporter
KO
K18138
multidrug efflux pump
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt01501
beta-Lactam resistance
scyt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMD_20850
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMD_20850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_20850
01504 Antimicrobial resistance genes [BR:
scyt01504
]
SAMD_20850
Transporters [BR:
scyt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SAMD_20850
Antimicrobial resistance genes [BR:
scyt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SAMD_20850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Anthrone_oxy
Motif
Other DBs
NCBI-ProteinID:
BAY44485
LinkDB
All DBs
Position
complement(2422203..2425460)
Genome browser
AA seq
1085 aa
AA seq
DB search
MILSIANTFIKRPVLTTVCTLLILLLGGVCIPLLPLNYLPDIAPIRVQVSATYTGADVET
VETAVTTTLERQINGVEGMQYMTSNSSAGSSQISVYFGTQTDKNIDQVNVQNRIARATPR
LPTTVQQFGVTAQTASTSILLVYAVYPENNEYDALFISNYIDLNLRDQLLRTPGVGDLTI
FGEKQYAMRLWLDPNALASRQLTVTDVATALRSQNILAGAGTLGQQPVPPGQSYEIPLRV
NGQFKNASEFENLVIKVGSNGDLIKLKDVGRAELGSETYASNARNNGKPAIGIAIYQLPG
SNALDVARNVQAQMNDLMKEFPPGLKAQIVYDTVGFVQASLEEVVKTLVEAIALVVLVIY
LFLQDWRATIIPVVAIPVSLIGALAFAYVFGFSLNNLTLFGLILATGLVVDDAIIVVEAI
AGKIEQGVRPYQASVEAMEELTGAVVSTSLVLMAVFIPVAFFPGSTGRMYQQFALVIAFS
IAISTFNALSFSPSISAILLRPPQPKRGPIGWFFNRFNQVLGWVIQRFIAIVKFLIRIRY
AVIGLFVVGLAATYFMFTHVPTGFVPTEDQGIVLGIIQAPDGVALGYTDKVIQNLEQILQ
KEPEIDNVFATSGFGFAGSGSNRGVFFAKLKPWEERTRPEQSSSAILKRINGAFQTIPEA
IITAVSPPPIQGFSTLGGFELQLEDRTNGRLTIDDFFANSQAVLAQANQKPALSGNVFTQ
FTASTPQFEINFDRNRLEALNVDFQQAVNTLGAAIGSQYVNDFTLGQRSYRVYVQAEGNY
RRSPDDIRQLYVRSANNQMVRLSEVATLTPITGPAVISHYNGFRAINLQGREAQGYSSGQ
AIQAMQQAVNEAAIPGVGSDWTGTAREELAAGNLGILIFGFGIVMVFLTLSAQYESYIDP
TIILLTVPLALLGALSALALRGLVNDVYANVALVMLIGLASKNAILIVEFANQAFEGGMT
IPQAALTAAQERFRPIVMTSSASLLGFFPLVIATGAGAASRWSLGTALFGGLLVATILSL
LIVPVLYVIIKNLEERFLKRKPSHRSKPPSSNRHEDQQATAIAQPKSAVTVTQNADDNAP
NDSTR
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtcgatcgccaatacctttatcaaacgcccggtcttaactaccgtgtgtacc
ctactgattctgctcctggggggcgtgtgtattccgctgctaccgctcaattacttgcca
gatattgcgccgattcgcgttcaggtctctgcaacctataccggggcagatgtggaaacc
gtggaaactgcggtgacgaccacgcttgagcgacaaattaacggtgttgagggaatgcag
tacatgacctcgaacagttcagcgggcagtagccaaatctcagtatatttcggtacgcag
actgataaaaatattgaccaagtgaacgtgcagaaccgcattgcccgtgccacacctcgc
ttaccgacgacggtgcaacaatttggtgtgacggcgcaaacagcttccacaagcattttg
ttagtgtatgcggtttatccagaaaataatgagtatgatgcgctctttatcagtaactat
attgatctcaatttgcgggatcaactcctgagaacacccggagttggcgatctgactatt
tttggtgaaaagcaatatgcaatgcggttgtggctcgacccgaatgcattggcgagtcgg
caattaaccgtgacagatgtcgccacggcattgcgatcgcaaaacattcttgcaggagct
ggaaccttgggtcaacagcctgtacctccgggtcaaagctatgaaattcctctgcgagtc
aatggtcagttcaaaaatgcttcagagtttgagaacctcgtcatcaaagtggggagtaat
ggggacttaatcaaactcaaagatgtgggtcgtgccgaactagggagcgagacttacgcg
agtaatgcgaggaataatggcaagcctgcgatcggcatagcaatttatcagttaccaggc
agtaatgcgctggatgtggcgagaaacgtccaggcgcagatgaatgacctgatgaaggag
ttcccacccggattaaaagcccagattgtttacgataccgttgggtttgtgcaagcgtcg
ctcgaagaagtggtgaaaacgcttgttgaagcgatcgccctcgtcgtgttggtgatttat
ctgtttctacaggattggcgagcaaccattattcccgttgttgcgattcccgtttcgctg
atcggcgctttagcttttgcttacgtgtttggattctcactgaacaatttaaccttattt
ggattaatcttagcgacaggattagtcgttgatgacgcaatcatcgtcgtagaggcgatc
gctggcaaaattgaacagggagtcagaccgtatcaagcgtcggtcgaagcaatggaggaa
ctgactggggcggtagtttcaacttcacttgtgttgatggcagtctttattcctgtggcg
ttttttccgggttcgaccgggagaatgtatcagcagttcgcgttagtgattgcgttttcg
atcgcaatctcaacgtttaatgcgctttcgttcagtcccagtatatctgcgattttgcta
cgtccaccacaacccaaacggggtccaataggctggttttttaaccgatttaatcaggta
ttgggatgggtgattcaacggtttatcgcgatcgtcaaatttctgattcgcatccgttac
gctgtcattggattgtttgtggtgggtttagccgcaacctactttatgttcacgcatgtt
cccacaggatttgttccgactgaagatcagggcattgtcttaggcattattcaagctcca
gatggggttgctcttggttataccgacaaagtgattcaaaatcttgaacaaattctgcaa
aaagaaccagagattgataacgttttcgcgacttcaggatttggctttgcaggtagtggg
tcaaatcgaggcgtgttctttgccaagctcaaaccgtgggaagagcgcactagacccgag
caaagttcgtctgcaatcttaaagcgaatcaatggcgcatttcaaacaataccagaagcc
attatcaccgcagtcagtccccctcccattcaaggcttcagtacgttgggtggatttgag
ctacagcttgaagaccgcaccaacgggcgattgacaatcgatgatttttttgctaactcc
caagcggttttagcgcaagcgaatcaaaaaccagcccttagcggcaacgtatttacgcag
tttaccgccagtaccccacagtttgaaatcaactttgatcgcaatcgtcttgaagcactc
aacgtcgattttcagcaagctgtaaacacacttggagccgcaattggctcgcagtatgtc
aacgattttactctgggacagcggagctaccgcgtttatgttcaagcagagggcaactat
cgtcgttcgccagatgatattcgtcagctttatgtgcgatcggcaaacaaccaaatggtt
cgattgagtgaggttgcaacactcacacccattacaggtccagccgtgatctctcactac
aacggcttccgcgcaatcaatctccaaggtagagaagcacagggctacagtagtggacaa
gcgattcaggcgatgcagcaagctgtgaacgaagcagcaataccaggtgttggcagtgat
tggacgggaactgctcgcgaagaattagctgcaggtaacttgggcattctgatttttggc
ttcggaatcgttatggtgtttctgacgctttccgctcagtatgaaagttatattgacccc
acgattattttgttgaccgtaccattagcgttgttgggtgcgctgagtgcgctcgcattg
cgaggtttggtgaacgatgtctacgcaaacgtagcattagtaatgttgattggactcgcc
tcgaaaaacgcgattctgatcgttgagtttgcgaatcaagcttttgaagggggcatgaca
attccccaggctgccttaactgctgcccaagagcggtttcgaccgattgtcatgacttcc
agtgcgtcgttgctcggatttttccccctcgtcatcgccacaggtgcgggtgctgcgtca
cgttggtcgttgggaacggcgttgtttggggggttactcgtggcaacgattttgagtttg
ctcatcgttccagtattgtacgtaatcatcaaaaatttggaagaacgcttcttaaagcgc
aaaccttctcatcgatctaagccgccttcctcaaatagacatgaggatcaacaagcaaca
gcgatcgcacaacctaaatcggctgtgactgtaacgcaaaacgccgatgataacgcgcct
aatgattcaacgcgttga
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