Scytonema sp. HK-05: SAMD_43570
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Entry
SAMD_43570 CDS
T09974
Name
(GenBank) peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00550
Peptidoglycan biosynthesis
scyt01100
Metabolic pathways
scyt01502
Vancomycin resistance
scyt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMD_43570
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMD_43570
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMD_43570
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scyt01002
]
SAMD_43570
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scyt01011
]
SAMD_43570
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
scyt01504
]
SAMD_43570
Enzymes [BR:
scyt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
SAMD_43570
Peptidases and inhibitors [BR:
scyt01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
SAMD_43570
Peptidoglycan biosynthesis and degradation proteins [BR:
scyt01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
SAMD_43570
Antimicrobial resistance genes [BR:
scyt01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SAMD_43570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
BAY46744
LinkDB
All DBs
Position
5033180..5034004
Genome browser
AA seq
274 aa
AA seq
DB search
MDNAGFSEKPQDTPSTSGEDIPEALRDSPDAAPKLSIRPLILIIGGVVGVALIAVVSGFL
FFVVTPKKTKDSQPSPVSSTPATPSKAGNSATSKENIVLGHFSYTEAPESELQPISNDRR
IKMRKAAAQKYLEMVAAARSAGVILVPISGFRSIKDQEQLFFAVGAQRNQTPAQRAAVSA
PPGHSEHHTGYAVDIGDGAARATDVNPNFEKTKAYQWLEANAARFSFEMSFPKNNVQGVS
YEPWHWRFVGDRDSLETFYKAKNLKPAQIQSTSQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttggataatgctgggttttctgaaaaaccgcaagacacaccatctacttctggtgaagat
attccggaagctttacgcgatagtcctgatgcagcacccaaactaagcattcgcccgttg
attttgatcattgggggagtggtgggagttgccttgatagccgtcgtgagtggttttttg
tttttcgtagtcacacccaaaaaaacaaaagattctcagccttcccctgttagttcaact
cctgcaactccatcaaaagcgggtaattcagccacctcgaaggagaatatagttttgggg
catttttcctacacagaagcccctgagtcggaactgcagccaatttctaatgataggcgc
atcaaaatgcgaaaagcagcagcgcagaagtatttagaaatggtagcagcagcacggagt
gcaggagtcattttggtgcctatttccggttttcgctctataaaagaccaagagcagtta
ttttttgccgttggtgcccagcggaatcagacaccagcacaacgggctgccgtcagtgct
ccccccggtcacagtgaacatcatacaggttatgctgtggatattggggatggagcagca
cgagcaaccgatgtgaatccaaactttgaaaaaactaaggcttatcaatggctagaggca
aatgcagcacgtttcagctttgagatgtcttttcctaaaaacaatgttcaaggtgtgagt
tatgagccttggcactggcgttttgtaggcgatcgcgatagcttagaaactttttacaaa
gctaaaaatttgaaacccgcccaaatccaatcaacttctcagtag
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