Scytonema sp. HK-05: SAMD_67990
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Entry
SAMD_67990 CDS
T09974
Name
(GenBank) putative multidrug efflux pump, HlyD family protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt01501
beta-Lactam resistance
scyt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMD_67990
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMD_67990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scyt03036
]
SAMD_67990
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_67990
01504 Antimicrobial resistance genes [BR:
scyt01504
]
SAMD_67990
Chromosome and associated proteins [BR:
scyt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SAMD_67990
Transporters [BR:
scyt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SAMD_67990
Antimicrobial resistance genes [BR:
scyt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SAMD_67990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
DUF3584
RNase_Y_N
HlyD_2
Biotin_lipoyl
CW_7
TFIIA
Motif
Other DBs
NCBI-ProteinID:
BAY49170
LinkDB
All DBs
Position
7948281..7949732
Genome browser
AA seq
483 aa
AA seq
DB search
MNSHQPSKPDSVVDSLEKEATSKTEKRKTGHFGLITLIAGVGALVTGLLAIGIMPRLQQR
AELAALAKSAQTDLPTVNVVKPKRAASSTDLSLPASIQANQETSVFARTNGYLRRRTVDI
GDKVQAGQLLAEIDTPEADQEVAQSRAEFARAEANLAQARANLAQKQSNLSEAKSNLAAR
QAELKQARTNLELTRQTWQRWQQLQQQGAVTQQAADERKTAFSANLANVDAVQARVNSDQ
NSVNAALASINSDQANVNAYLASVAASRANVEKSVVLQSFKRVTAPYSGVITARNIDAGA
LISAGSNSNSTNAWLFKIAQTNNLRIRVNVPQTLVQSIRQGQTAQIHVREFPSKPFTGKV
VRTADALDPKSNTLLTEIQVPNSDGTLRPGMYAQVTFTTTRVNPPVLVPANTLVINSEGT
QVASVTKDQTVHYRKVEIGRDYGTQVEITTGLSPDESLITNPTDDLREGTRIQAVAVKPK
KPN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcatcaaccttccaaacctgattctgttgtcgattctcttgagaaagaggca
acctcaaaaactgaaaaacgcaaaacaggtcatttcggcttgataacgctcattgctggt
gttggtgcattggtgactggacttctggcaattggcattatgcctcgtcttcaacagcgt
gcagaattagctgcacttgccaagtctgcccaaacagatcttcccactgtcaatgttgtc
aagcccaaacgtgctgctagttctacggatttatcgctacctgctagtattcaagcaaac
caagaaacatcagtatttgcccgaacgaatggctatttgcggcggcgaactgtggatatt
ggtgacaaagtacaggcagggcagttacttgcagaaattgacacaccagaagccgaccaa
gaggtggcgcaaagccgtgctgagtttgcaagagcagaagcaaatctcgcccaagcccgt
gctaacttagcccaaaagcagagcaacctttctgaggctaaatcaaacttagcggcgaga
caggcagaactgaagcaagcacgcacgaatttagaattaacccgtcaaacctggcagcgc
tggcaacagcttcagcagcaaggggcagtaactcagcaagctgccgacgaacgcaaaacg
gcattcagtgctaaccttgctaatgtcgatgctgttcaagcacgtgtgaattccgaccaa
aacagtgttaatgctgcgcttgctagtatcaactctgaccaagccaacgtcaacgcgtat
ctcgccagtgttgccgctagtcgcgcaaatgtcgaaaaatcggttgtcttgcaatctttt
aaacgtgtgacagctccctacagtggggtgattacagcacgcaacatagacgcgggagcg
ttaatttctgctggtagtaatagtaactcaactaatgcatggctatttaaaatcgctcaa
accaacaacttacgtatccgtgtgaatgtgccacagactcttgtgcaatcgattcgccaa
ggtcaaacagctcagattcacgtccgtgagttccccagcaaaccgttcacaggcaaagtt
gttcgcactgctgacgcccttgatcccaaatcaaacacccttttgacagaaatccaagtg
ccaaattccgatggtacactgcgaccgggcatgtatgctcaagtcacatttaccactacc
cgtgtgaatccacctgtgctagtgccagctaatactttggtgattaactcggagggtact
caagtcgctagtgtgaccaaagaccaaactgtacactatcgcaaggtagagattggtcga
gactatggcactcaagtagaaatcactaccggtttgagcccagatgaatccctaattact
aatcccaccgatgatttacgcgaggggacacggattcaagctgttgctgttaaacctaag
aagccaaattag
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