Saccharophagus degradans: Sde_1119
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Entry
Sde_1119 CDS
T00335
Name
(GenBank) secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sde
Saccharophagus degradans
Pathway
sde01501
beta-Lactam resistance
sde01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sde_1119
01503 Cationic antimicrobial peptide (CAMP) resistance
Sde_1119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sde03036
]
Sde_1119
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_1119
01504 Antimicrobial resistance genes [BR:
sde01504
]
Sde_1119
Chromosome and associated proteins [BR:
sde03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sde_1119
Transporters [BR:
sde02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sde_1119
Antimicrobial resistance genes [BR:
sde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sde_1119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
Beta-barrel_RND
HH_MFP_RND
HH_CzcB
BSH_RND
CzcB_C
RND-MFP_C
Beta-barrel_YknX
HH_EMRA
HH_AprE
BSH_CzcB
BSH_CusB
Motif
Other DBs
NCBI-ProteinID:
ABD80381
UniProt:
Q21LP8
LinkDB
All DBs
Position
complement(1449526..1450635)
Genome browser
AA seq
369 aa
AA seq
DB search
MKNFLLTLLGLVIVVGLIAGIKASQIFAMIGAMETMAMPPSVVASSPVEQQEWEQTLSSV
GDLEAVQGVVVGADLPGRVVKLEFTPGAYVEEGAPLIQQDISSEKAQLRAAEAAVALAKS
NLDRSSELLRKQVVSKSDFDAADANYKSAVAQADNIRTTIQKKTITAPFAGRLGIRMVNL
GQDLAAGTPIVTLQTMDPIFVNFYLPQQELPKITLGAEVRLTTDAVPGKNFTGAITAINP
EIDPATRSVRVQATLKNDSNELLPGMFTKVKVIMPEKRKVLAVPQTAIAYATYGDSVFVV
TKENDALVAKQQFVRLGTTLGDYVEVTAGVTAEDEVVSSGVFKLQNGAPISINNEVQPKY
EQAPTPDNS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactttttacttacactactgggcctagtaattgttgttggcctaattgcaggc
ataaaagcatcgcaaatattcgcaatgataggcgcaatggaaaccatggccatgccccct
tctgtggttgcctcttcgccagtagagcagcaagagtgggagcaaacgctatcgtcggtt
ggcgaccttgaagcagtgcaaggtgtggtggtaggtgcagacctacccggtcgcgttgtt
aagctagagttcaccccaggcgcttacgttgaagaaggtgcaccgttaattcagcaggat
atatcatccgaaaaagcgcaactgcgcgcggccgaagccgctgttgctttagctaaaagc
aatttagatcgctctagcgaattgctgcgtaaacaagtggtgtctaaatccgattttgac
gctgccgatgccaattacaaatccgcagtggcacaagccgataacattcgcaccactatt
caaaagaaaaccattaccgcaccgtttgcggggcgtttaggtattcgcatggttaacttg
ggccaagatttagcagctggcaccccaattgttacgctgcaaaccatggacccaatattt
gtaaacttctacctaccccaacaggaattacccaaaatcaccctgggtgcagaagttcgc
ttaaccacagatgccgtgccaggtaaaaactttaccggtgcaattaccgcgataaacccc
gaaattgacccagctactcgctcggtgcgcgtgcaagccactttaaaaaatgacagcaat
gagctgttgccaggtatgtttaccaaagtaaaagtcatcatgcccgagaaaagaaaagtg
ctagcagtgccccaaacggctattgcttacgccacttacggcgactcggtatttgtagtg
actaaagagaacgacgctctagtggccaagcaacagtttgtgcgcttaggcaccacactg
ggcgactacgtggaagttaccgcaggcgttacagcagaagacgaagtggttagttccggt
gttttcaaattacaaaatggcgcacctatttcgattaacaacgaagtacagcccaaatac
gagcaagcaccaacacctgacaactcgtaa
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