Saccharophagus degradans: Sde_2085
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Entry
Sde_2085 CDS
T00335
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
sde
Saccharophagus degradans
Pathway
sde00290
Valine, leucine and isoleucine biosynthesis
sde00660
C5-Branched dibasic acid metabolism
sde01100
Metabolic pathways
sde01110
Biosynthesis of secondary metabolites
sde01210
2-Oxocarboxylic acid metabolism
sde01230
Biosynthesis of amino acids
Module
sde_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Sde_2085
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Sde_2085
Enzymes [BR:
sde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Sde_2085
4.2.1.35 (R)-2-methylmalate dehydratase
Sde_2085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ABD81345
UniProt:
Q21IY4
LinkDB
All DBs
Position
complement(2668876..2669523)
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AA seq
215 aa
AA seq
DB search
MRSFTTLNGLAAPMDRPNVDTDLIIPKQFLKSIQRTGFGANLFDELRYLDKGEPGRDNSN
RPINPDFPLNFKRYEGASVLLARENFGCGSSREHAPWALDEYGFHCIIAPSFADIFFNNC
FKNGILPIVLDEEIVESLFVEMYQTEGYRLVIDLPAQTVTTPSGNSYSFEVDEFRKHCLL
KGLDDIGLTLQHADSITAYEAERAKRAPWLFAASE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagaagttttactacactaaacgggcttgcggcacctatggataggcccaatgtggat
accgatttaattatccctaagcagtttcttaaatctattcagcgtacgggctttggagcc
aacttgttcgacgagctgcgctatttagataaaggcgaacctgggcgagacaatagcaat
cgccccattaacccagatttccctcttaactttaaaaggtacgaaggggcttctgtattg
cttgcacgtgagaactttggctgcggttcaagccgtgagcacgcgccttgggcgctagac
gagtatggttttcactgcattattgcacctagcttcgccgatatttttttcaataactgc
tttaagaatggcatcttacccattgttttagatgaagaaattgtggaatctttgtttgtg
gaaatgtatcaaacagaaggctatcgtcttgttatcgatttgccagctcaaacggtgaca
acgccttcgggtaatagctactcattcgaggtggacgagttccgcaagcactgtttgctg
aaaggtttagatgatattggccttacgctgcagcacgccgatagcattaccgcttatgaa
gcagagcgcgcaaagcgtgcgccttggttgtttgctgcatctgaataa
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