Saccharophagus degradans: Sde_2106
Help
Entry
Sde_2106 CDS
T00335
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sde
Saccharophagus degradans
Pathway
sde00020
Citrate cycle (TCA cycle)
sde00785
Lipoic acid metabolism
sde01100
Metabolic pathways
sde01110
Biosynthesis of secondary metabolites
sde01120
Microbial metabolism in diverse environments
sde01200
Carbon metabolism
sde01210
2-Oxocarboxylic acid metabolism
Module
sde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sde_2106
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Sde_2106
Enzymes [BR:
sde01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Sde_2106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
2-oxogl_dehyd_N
PFOR_II
DUF7342
Motif
Other DBs
NCBI-ProteinID:
ABD81366
UniProt:
Q21IW3
LinkDB
All DBs
Position
complement(2690725..2693586)
Genome browser
AA seq
953 aa
AA seq
DB search
MPCHTVGEMQESIMELLWKTSHLSGGNAAYVEDQYESYLSDPHSVSEEWRDYFDKLPRVN
GSASEDVNHSEIIKYFELLGKNRARPIIVPGAGSGDIAHERKQVEVVQLVNAYRLSGHQK
ANIDPLNLRAVKNPVDLDLGFHRLNTADLDSVFQTGDLAFGYKEAKLKDIIADLEKTYCG
NIGAEVMHITNYEERRWLLNRLERSRSQPDFGPKAKRNILRRLTAAEGLERHLDSKYPGT
KRFGLEGGESFIPLLDALIRRVGEYGAKEMVLGMAHRGRLNALVNILGKNPSDLFDEFEG
KKLVDTSGDVKYHQGFSSNVMTPGGEMHLALAFNPSHLEIVSPVVEGSVRARQDRRGDKD
GHTVVPVVVHGDAAFAGQGVVMETFQMSQTRAYKTGGTVHLVINNQVGFTTSRADDARST
AYCTDVAKMIETPIFHVNGDDPEAVVYVTQLAADYRNEFKKDVVIDLVCYRRRGHNETDE
PSSTQPLMYKAIRSHKTTRTVYAEQLVNAGVVTQDEADQMTNDYRAALDRGEHVARGLVS
EPDSSLFVNWSPYIGHDWNTPADTTYPIKELQSLAEQTSHVPDGVQVQRQVAKIYDDRRK
MAGGALPINWGMAETLAYATLLKEGHKIRLTGQDVGRGTFSHRHAVVHNQKTGEAYIPLA
NISEDQAPLDIYDSLLSEEAVLAFEYGYATTSPKGLVIWEAQFGDFANGAQVVIDQFITS
GEHKWQRLCGLTMLLPHGYEGQGPEHSSARLERFMQLCAEHNIQVCIPTTPAQVYHMIRR
QAIRPMRRPLVVMSPKWILRHKLATSTLEELAEGSFKTVIGDDVVKPEEAKRVILCSGKV
YYHLFEAREEREEKDVALIRIEQLYPFPEEALRVELAKYPGLVDVVWCQEEPQNQGAWYS
SQHRMRRVVERVNEDAELRYVGRASSSAPAAGYMSTHLEEQNKFINAALDTSV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtcatacggtgggcgaaatgcaagaaagtatcatggagttattgtggaaaacc
tcgcatctatctggaggtaacgccgcatatgtagaagatcagtacgaatcctatctgtca
gaccctcattccgtttcggaagagtggcgcgactacttcgataagttaccccgtgttaac
ggcagcgctagcgaagatgtaaaccattccgaaatcattaagtatttcgagctgctcggt
aaaaaccgcgcgcgtccaataattgtgcccggtgctggtagtggcgatattgcccacgag
cgcaagcaggtagaagttgttcagttggtaaatgcctaccgcttaagcggtcatcaaaaa
gccaatatcgatccgctaaatctacgcgcagttaaaaaccctgttgatttagacttgggc
tttcaccgcttgaatacagccgatttagattctgtattccaaaccggtgacctcgcattt
ggctacaaagaagccaagctgaaagacatcattgcagacctagaaaaaacttactgcggc
aacattggcgcagaagttatgcacattactaactacgaagagcgtcgctggttgttaaac
cgcttagagcgttcgcgttctcagccagatttcggccctaaagctaagcgcaatatcttg
cgtcgtttgactgcagccgaaggcttagagcgtcatttagatagcaaatacccaggtaca
aagcgctttggtttggaagggggcgaaagcttcattccattgcttgatgcgttaattcgt
cgtgttggcgaatacggtgccaaagaaatggtattgggtatggctcaccgtggccgctta
aatgcgctggtgaacattcttggtaaaaacccatctgatttgtttgatgagtttgaaggt
aagaagctagtagatacctctggtgacgttaagtatcaccaaggtttctcgtcaaacgta
atgactcctggtggcgaaatgcaccttgcgttggcgtttaacccatctcacttggaaatt
gtatctccagtggttgaggggtctgtacgtgcacgtcaagatcgccgcggcgacaaagac
ggccacaccgtagtgcctgttgtagtacatggtgatgctgcgtttgctggtcagggcgtt
gtgatggaaacattccaaatgtcacaaacccgcgcatacaaaactggcggtactgtgcac
ttggtaattaacaaccaagtaggtttcactactagccgtgcagacgacgcacgctctaca
gcttactgtaccgacgtggcaaaaatgatcgaaacaccgatcttccacgttaacggtgac
gacccagaagcggttgtttacgttactcaattggcagcagattaccgcaacgaatttaag
aaagatgtggttattgatttggtttgttatcgccgtcgtggccacaacgaaaccgatgag
ccttcatctactcagccgttaatgtacaaggctattcgttcgcacaaaactactcgcact
gtgtatgcagagcagcttgttaacgctggtgtggttactcaagacgaagcggaccagatg
actaacgattatcgtgctgctttggatagaggcgagcacgtagcgcgtggtttggtaagc
gagccggattcttcgctgtttgtaaactggtcgccttatattggtcacgactggaataca
cctgcagatactacgtatccaatcaaagaattgcagtcgttggcagagcaaactagccat
gtgccagatggtgttcaggtacagcgtcaggtagcgaaaatctacgacgaccgtcgcaaa
atggcgggcggtgccttgccaattaactggggcatggccgaaactctggcttacgctacc
ttgttgaaagaaggccataaaattcgtttaacggggcaagatgttggtcgtggtactttc
tcgcatcgccatgctgttgtgcataaccaaaaaactggtgaagcttacattccgttagcg
aatatttcagaagatcaagcgccgttagatatttacgattcgttattatctgaagaagcg
gtgctggcgttcgaatacggttacgcgactacttcgccaaaaggtttggttatttgggag
gctcagttcggtgatttcgccaacggcgctcaagttgttattgaccaatttattacaagt
ggcgagcacaagtggcagcgtttgtgtggcttaactatgctattgccacatggttacgaa
gggcaggggccagagcactcttcagcacgtttagagcgctttatgcaattgtgtgcagag
cacaacattcaagtgtgtatccctaccacgcctgcgcaggtttatcacatgatccgccgt
caggctattcgcccaatgcgcagaccacttgttgtgatgagcccgaaatggattcttcgt
cacaagttggcaacgtctacgttagaagagctagctgaaggtagctttaaaacagtaatt
ggcgatgacgttgttaagccagaagaagccaaacgtgtaattttgtgtagcggtaaggtt
tattaccatcttttcgaggctcgcgaagagcgtgaagagaaagacgttgcattaattcgc
attgagcaactttacccattccccgaagaggcgctgcgcgttgagctagcaaaataccct
ggtttggtggatgtagtgtggtgtcaggaagagccgcaaaaccaaggcgcttggtactct
agccagcaccgcatgcgcagagttgtagaacgagttaacgaagacgcagagttgcgttac
gttggtcgggcatcttcttctgcacctgcagcgggttacatgagcacccacttggaagaa
cagaataagttcatcaacgcggcattggacacttccgtttaa
DBGET
integrated database retrieval system
