Stutzerimonas degradans: GOM96_00530
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Entry
GOM96_00530 CDS
T08431
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00020
Citrate cycle (TCA cycle)
sdeg00785
Lipoic acid metabolism
sdeg01100
Metabolic pathways
sdeg01110
Biosynthesis of secondary metabolites
sdeg01120
Microbial metabolism in diverse environments
sdeg01200
Carbon metabolism
sdeg01210
2-Oxocarboxylic acid metabolism
Module
sdeg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdeg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GOM96_00530
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GOM96_00530
Enzymes [BR:
sdeg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
GOM96_00530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
DUF7284
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
QGW19534
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All DBs
Position
104796..107627
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AA seq
943 aa
AA seq
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MQESVMQRMWDSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPSGGSAAADVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRLRGHQAAQLDPLALQQ
RPVPADLAITNYGLTDADLDTVFRTGDLAIGKDEASLREILKALQETYCRTIGAEFAHIV
DSEQRNWFIQRVESVRGRPDFSPEIKSHLLERLTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDEIIQRSGSYGTKEIVIGMAHRGRLNVLVNTFGKNPRDLFDEFEGKKVEGLSSGD
VKYHQGFSSNVMTPGGEIHLAMAFNPSHLEIVSPVVEGSVRARQDRRCDPAGDKVLPVTI
HGDAAVAGQGVVMETFQMSQTRAYRTGGTIRIVVNNQVGFTTNKQEDARSTEYATDVAKM
IQAPIFHVNADDPEAVLFVTQLAVDYRMQFKRDIVLDLICYRRRGHNEADEPSGTQPLMY
QKIAKQRTTRELYADALIQSNVLDAERVQAKVDEYRTALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTSFDLKTLQDLSSKLLNVPEGFVVQRQVAKILEDRQKMGAGALAIN
WGFAETMAYATLLFEGHPVRISGQDVGRGTFSHRHAALHNQKDGSTYIPLQHLYEGQPRF
DLYDSFLSEEAVLAFEYGYATTTPNALVVWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEQNIQVCVPTTPAQVYHMLRRQAIRPLRKP
LVALTPKSLLRHKLAISTLEELTEGSFQTVIPEIDPIEAAKVERVIMCSGKVYYDLLEKR
RNEGRDDIAIVRIEQLYPFPEEDLAEVLAPYQNVKHIIWCQEEPMNQGAWYCSQHHMRRV
ATAHKKELFLQYAGRDASAAPAVGYASMHAEQQEKLLQDAFTI
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtaatgcagcgcatgtgggacagcgcccacctatccggtggtaacgct
gcctatgtggaagagctttatgagctctacctgcacgaccccaacgcagtgcccgaagag
tggcgcacttatttccagaagttgccttctggtggcagcgcggcagcagacgtgtcgcac
tcgacgattcgcgatcatttcgtgttgctggcgaaaaaccagcgtcgcgcacagcctgtc
tccgcaggcagcgtcagcagcgagcatgagaagaagcaggtcgaagttctgcggctgatc
caggcgtatcggctgcgtggtcatcaagcggcgcagcttgatcccctggcactgcagcag
cgtccggttcccgctgatcttgcgatcaccaactatggtctgaccgatgcggatttggat
accgttttccgcactggcgatctggcgataggcaaagacgaagccagcttgcgtgaaatc
ctgaaagcgttgcaagagacgtattgccgcaccatcggcgcggagtttgcccatatcgtc
gattccgagcagcgcaactggttcatccagcgcgtcgagagcgtacgtggccgtccggat
ttctcgccggaaatcaagagtcatctactggagcgtctgacagccgccgaaggactggaa
aagtatctcggcaccaaatatccggggaccaagcgttttggtctggaaggtggtgagagc
ctgattccgatgctggacgaaatcatccagcgctccggctcctacggcaccaaggaaatc
gtcatcggcatggcccaccgtggccgtctcaacgtgctggtcaacaccttcggcaagaat
ccgcgtgatctgttcgacgaattcgaaggcaagaaggtcgaagggctcagctccggtgat
gtcaagtatcatcagggcttctcttccaacgtcatgacccccggtggcgagatccatctg
gcgatggctttcaacccctcgcacctggaaatcgtttcgccggtggttgagggttcggtg
cgtgctcgtcaggaccgtcgctgtgatccggccggagacaaggttcttccggtaaccatc
cacggtgatgccgctgtcgccggtcagggcgtggtgatggaaaccttccagatgtcgcag
acgcgtgcttaccgcaccggcggcacgattcgcatcgtggtcaacaaccaggtcggcttc
accactaacaagcaggaagatgctcgttcaaccgagtacgctactgacgtggcgaagatg
attcaagcaccgatcttccacgttaatgcagacgaccccgaggcggtgctgttcgttacc
cagctcgctgtggattatcggatgcagttcaagcgcgatatcgtgctggatctgatctgc
tatcgccgtcgcggtcataacgaggctgacgagccaagcggcacccagccgctgatgtat
cagaagatcgctaagcagcgcaccactcgtgagctgtacgctgatgcgctcatccagtcg
aatgtactggacgccgagcgcgttcaggctaaggtcgatgagtatcgcaccgcgctggat
aacggcctgcacgtggtcaagagcctggtcaaggaaccgaacaaggagctcttcgttgac
tggcgtccatatctgggccatgcgtggactgcacgtcacgacaccagcttcgatctgaag
accttgcaggacctgtccagcaaactgttgaatgtccctgaaggcttcgttgtccagcgt
caggttgcgaagatccttgaggatcggcagaagatgggagcgggcgcgctggccatcaac
tggggcttcgcggagaccatggcctacgctacgctgctgttcgaaggccatccggtgcgt
atttccggtcaggacgtcggtcgcggtaccttctcgcatcgccatgctgcgttgcacaat
cagaaggacggcagtacctacattccgcttcagcacctctacgaagggcagccgcgcttc
gatctgtatgactcgttcctttccgaggaagcggttctggcgttcgagtacgggtatgcc
actactactcccaacgccctcgtggtttgggaggcgcagttcggcgacttcgccaacggt
gcgcaggtcgttatcgaccagttcatcactagcggcgaacacaagtggggtcgtctctgc
ggtctgaccatgctgctgccgcacggttatgaggggcagggtccggagcactcctccgcg
cgtctggagcgctacctgcaactgtgtgccgagcagaacatccaggtctgcgtgccgacc
acaccagctcaggtctatcacatgctgcgtcggcaggcgattcgtccgctgcgcaagccg
ctggttgccctgacgccgaagtcgctgttgcgtcacaagctcgctatctcgacgctggag
gagcttaccgagggttcgttccagaccgttatcccggagatcgatccgatcgaagcggcg
aaggtcgagcgcgtgatcatgtgcagcggcaaggtctactacgatcttctggaaaagcgc
cgcaacgaaggtcgcgacgatattgccatcgtgcgtatcgagcagctctatcccttccct
gaggaggacctcgccgaggtgctggcgccttatcagaacgtcaagcacatcatctggtgt
caggaagagccgatgaaccagggcgcgtggtactgcagccagcaccatatgcgtcgcgtc
gcgactgctcacaagaaggaactgttcctgcaatacgctggtcgtgatgcatccgcggct
ccggcggtcggttatgcgtcaatgcatgccgagcagcaggaaaagctcctgcaggacgcc
ttcaccatttaa
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