Stutzerimonas degradans: GOM96_12015
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Entry
GOM96_12015 CDS
T08431
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg01501
beta-Lactam resistance
sdeg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GOM96_12015
01503 Cationic antimicrobial peptide (CAMP) resistance
GOM96_12015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeg02000
]
GOM96_12015
01504 Antimicrobial resistance genes [BR:
sdeg01504
]
GOM96_12015
Transporters [BR:
sdeg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GOM96_12015
Antimicrobial resistance genes [BR:
sdeg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GOM96_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF2604
Motif
Other DBs
NCBI-ProteinID:
QGW21678
LinkDB
All DBs
Position
2598176..2601313
Genome browser
AA seq
1045 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLAGGLAILGLPVNQYPSIAPPAVGISVSYPGASAQTVQDT
VVQVIEQQMNGIDGLRYISSASNSDGSMEITVTFNQGTDPDIAQVQVQNKLQLATPLLPQ
EVQQQGIRVTKSVRNFLMVVGVVSADGSMTQSDLADYIVSNIQDPLSRTPGVGDFQVFGS
QYAMRIWLDPARLNNFQLTPTDVANAIRVQNVQVSAGQFGGLPAVPGQQLSATIIGKTRL
QTPEQFREILLKVNGDGSQVRLKDVARVELAAERAAITAQYNGKPAAGIGIKLATGANAL
DTAKAVRQTIGELQPFFPAGMEIVYPYDTSPVVSVSITNVVHTLFEAIVLVFLVMYLFLQ
NFRATLIPTLAVPVVLLGTFGLLAVFGFSVNTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLSPLEATRKSMGQIQGALVGIGLVLSAVFLPMAFFGGSTGVIYRQFSITIASAMTL
SVLVALVFTPALCATLLKPVEKGHHHEKRGFFGWFNRTFDRGVRRYEQGVVAVLRRKLPF
LILYVAIVAVLAVLFSRLPSAFLPDEDQGVLFVQVQTPVGSTAERTQQTVDAMREYLLKE
EGDVVNSVFTVTGFNFAGRGQNSALGFVGLKPWDQRPDAEDSVFALAKRAQQRFAGFRDA
MVFAFAPPAVMELGTATGFNFYLQDRGGLGHEALMGARNQFLGLAAQSPVLQAVRPNGLN
DEPQYQLLIDDEKARTLGVSLDAINSALSIGWGSSYVNDFIDRGRVKKVYLQGIAPSRMG
PEDLDKWFVRNDQGEMVPFSAFGSGQWIYGSPKLSRYNGVSSMEILGEAAPGYSTGDAMA
EVERLAQQLPAGVGVSWTGLSFEERLSGGQAPALYALSLLVVFLCLAALYESWSIPFAVM
LVVPLGVIGALLATMGRGLSNDVFFQVGLLTTIGLTAKNAILIVEFAKDLHGEGKSLFDA
AVEACRMRLRPIIMTSLAFTLGVVPLALASGAGAGSSHAIGTGVIGGMVTATLLVIFWVP
LFFVLVTSLAGGRKAAAANEKGEVQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagttcttcattgatcgcccgatcttcgcctgggtgatcgcgctggtgatcatg
ctcgccggcgggctcgccattctcggcttgccagtcaaccaatatccgagcatcgcgccg
cctgcggtcggcatctccgtgagctacccgggcgcttccgcgcagaccgtgcaggacacg
gtggtgcaggtcatcgagcagcagatgaacgggatcgacgggctgcgctacatctcgtcg
gcgagcaactccgacggcagcatggagatcacggtgaccttcaaccagggcaccgatccg
gatatcgcccaggtgcaggtgcagaacaaactgcagctggcgacgccgctgctgccgcag
gaagtacagcaacagggcatccgcgtgaccaagtcggtgcgcaacttcctcatggtggtc
ggcgtcgtctcggcggacggcagcatgacgcaaagcgacctggccgactacatcgtctcc
aacatccaggacccgctgtcgcgtacgcccggggtcggtgatttccaggtgttcggctcg
cagtacgccatgcgcatctggctcgatcccgcacggctgaacaatttccagctcacgccc
accgacgtggccaacgccatccgtgtgcagaacgtgcaggtttccgccggccagttcggc
ggtctgccggccgtgccggggcagcagttgagcgccaccatcatcggcaagacgcgcctg
cagacgcccgagcagttccgcgagattctgctcaaggtcaatggcgacggttcgcaggtg
cgcctcaaggacgtcgcccgcgtcgaactggctgccgagcgggcggcgattaccgcccag
tacaacggcaagccggccgccggtatcggtatcaagctggccactggcgccaacgcgctg
gataccgccaaggcggtgcgccagaccatcggcgagctgcagccgttcttcccggcgggg
atggagatcgtctacccgtacgacacctcgccggtcgtttcggtatcgatcaccaacgtg
gtgcacaccttgttcgaggccatcgtcctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgccacgcttattccgacgctggcggtgccggtggtgctgctggggaccttc
ggtctgctggcggtgttcggtttcagcgtcaacacgctcaccatgttcgcgatggtgctg
gccatcggtctgctggtggacgacgccatcgtcgtggtggagaacgtcgagcgggtgatg
gccgaggaaggactgtcgccgctggaggcgacgcgcaagtcgatgggacagattcagggc
gcactggtcggcatcggcctggtcctgtcggcggtattcctgccgatggccttcttcggc
ggttccaccggcgtgatctaccggcagttctcgatcaccatcgcttcggcgatgacgctc
tcggtgctggtggcgctggtcttcaccccggcgctgtgcgcgacgctgctcaagcctgtc
gagaagggacatcaccacgagaagcgcggtttcttcggctggttcaaccgcacgttcgat
cgcggcgtgcgccgctacgagcagggcgtggtcgcggtgctgcggcgcaagctgccgttc
ctgattctgtatgtcgccatcgtcgccgtgctggcggtgctgttcagccgtctgcccagc
gcgttcctgccggacgaggatcagggcgtgctgttcgtccaggtgcagacgccggtgggc
tcgaccgccgagcgtactcagcagaccgtggacgccatgcgcgagtatctgctgaaggag
gagggtgacgtcgtcaattcggtatttaccgtcaccggcttcaacttcgccggccgtgga
cagaactcggcgctgggctttgtcggcctcaagccgtgggatcagcgtccggatgccgag
gactctgtgttcgcgctggccaagcgcgcacagcaacgcttcgccggcttccgcgacgcc
atggtgttcgccttcgcgccgcccgcggtgatggagctgggcaccgcgaccggtttcaac
ttctatctgcaagaccgtggcgggctcggccacgaggcgctgatgggtgcgcgcaaccag
tttctcgggttggcggcgcagagcccggtattgcaggcggtgcggccgaacgggctgaac
gacgaaccgcagtaccagctgctgatcgacgatgaaaaggcgcgcacgctaggggtttcc
ctggacgcgatcaatagcgcgctgtcgatcggctgggggtcgagctacgtcaacgatttc
atcgaccgcggccgggtgaagaaggtctacctgcaaggcatcgcgccatcgcgcatgggc
ccggaggatctcgacaagtggttcgtgcgcaacgatcagggcgaaatggtgccgttcagt
gcgttcggcagcggccagtggatctacggctcgccgaagctgtcgcgctataacggcgtt
tcgtcgatggaaatcctcggcgaggcggcgcccggttacagcaccggtgatgcgatggcc
gaggtcgagcggctggcgcagcagctgccggcgggcgtcggggtgtcctggacgggactg
tcgttcgaggaacgcctgtcgggcgggcaggcgccggcgctctacgcgctctcgctgttg
gtggtgttcctctgcctggcggcgctgtatgaaagctggtcgattccgttcgccgtgatg
ctggtcgtgccgctcggtgtcatcggcgcactgctggcgacgatggggcgaggcctgagc
aacgacgtgttcttccaggtcggtctgctgacgacgattggcctgaccgcgaagaacgcg
atcttgatcgtcgagttcgcgaaggatctgcatggcgaaggcaagagcctgttcgatgcc
gccgtcgaggcctgccggatgcgcctgcggccgatcatcatgacctcgctggcgttcacc
ctcggcgtggtgccgctggcgctggccagcggcgccggagcaggcagctcgcatgccatc
ggcaccggcgtgatcggcggcatggtcacggcgaccctgctggtgattttctgggtgccg
ctattcttcgttctggtgacctcgctcgccggcggccgcaaggctgcagccgcgaacgag
aagggagaggtgcaatga
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