Stutzerimonas degradans: GOM96_14765
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Entry
GOM96_14765 CDS
T08431
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00300
Lysine biosynthesis
sdeg00550
Peptidoglycan biosynthesis
sdeg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GOM96_14765
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GOM96_14765
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdeg01011
]
GOM96_14765
Enzymes [BR:
sdeg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GOM96_14765
Peptidoglycan biosynthesis and degradation proteins [BR:
sdeg01011
]
Precursor biosynthesis
Amino acid ligase
GOM96_14765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Antitox_RHH
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
QGW22199
LinkDB
All DBs
Position
3151498..3152964
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AA seq
488 aa
AA seq
DB search
MPMPLNQLLPQADSSVLIRELTLDSRKVLPGDLFLAVPGLQHDGRSHIADAIARGAAAVA
YESEGAALQPAGTDAVLVPVRQLASQLSAIAGRFYGEPSRSLHLLGVTGTNGKTSVSQLI
AQALDRLGERCGIIGTLGHGFHGELEQGYHTTPDAIGVQATLASLKQHEARAVAMEVSSH
GLEQGRVAALAFDVAVFTNLSRDHLDYHGSMEAYAAAKARLFDMPGLRCRVINLDDAFGR
RLAAQPQESRLITYSLEDASADLYCPDPQLDDDGIHARLITPQGERSLRSPLLGRFNVSN
VLAAVGALLGMDWPLDEILAVLPELHGPAGRMQRLGGGDLPLVVVDYAHTPDALEKVLTA
LRPHARGQLVCLFGCGGERDRGKRALMAQVAERLADRVVATDDNPRNEPADQILEDIRQG
FAQPERVQFRPGRGAAIAAAIAAAQPEDVVLLAGKGHEDYQEICGVRQPFSDLDEACKAL
TAWGKHDA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgccattgaaccaactgctgccccaggccgacagttccgtgctgatccgcgag
ctgaccctcgatagccgcaaggtgctcccgggcgacctgtttctcgccgttcccggcctg
cagcacgacggtcgcagccatatcgccgacgccattgcacgtggcgccgcggctgttgcc
tatgaatccgaaggcgctgcgctgcagcctgccggcactgatgcggtgctggtgccggtt
cgccagctcgccagccagctgtcggcaatcgccggccgcttctacggcgagccgagccgc
agcctgcatctgctcggggtgaccggcaccaacggcaaaaccagtgtcagccaactgatc
gcgcaggcgctggatcgtctcggcgagcgctgcggcatcatcggtacgctgggccacggc
tttcatggggagctggagcagggctaccacaccacgccggacgccatcggcgtgcaggcg
acgctggccagcctgaagcagcacgaagcgcgcgccgtggcgatggaagtctcctcgcac
gggctggagcagggccgcgtggccgcactggcgttcgacgtggcggtattcaccaacctg
tcgcgtgaccatctggattaccacggcagcatggaagcctacgcggcggccaaggcgcgt
ctgttcgacatgccgggtctgcgctgtcgtgtgatcaacctggacgacgccttcggccgt
cgactggctgcgcagccgcaagagtcgcgcctgatcacctacagcctggaggacgcctcg
gccgatctgtattgcccggatccgcagctggacgacgacggcattcatgcgcgactgatc
acgccgcagggcgagcgctcgctgcgcagcccgctgctggggcgcttcaatgtcagcaac
gtgctggcagccgtcggcgcgctgttaggcatggactggccgctggatgaaattctcgcc
gtgctgccggaactgcacggtccggccggtcgcatgcagcgtctgggcggcggcgacctg
ccgctggtggtggtcgattacgcccatacgcccgatgcgctcgaaaaggtgctcaccgca
ctgcgtcctcatgcgcgtggacaactggtttgcctgttcggctgtgggggcgagcgcgac
cgcggtaagcgtgcgctgatggcgcaggtcgccgaacggctggccgatcgggtggtggcg
accgacgacaatccgcgcaacgagccggccgaccagattctcgaagacattcgccagggc
ttcgcccagccggagcgggttcagttccgcccgggacgtggagccgcgatcgccgcggcg
attgccgccgcgcagccggaggatgtggtgctgctcgccggaaaggggcacgaggactat
caggagatctgcggcgtgcgtcagccgttctccgacttggatgaggcttgcaaggccctg
accgcctgggggaagcatgatgcgtga
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