Stutzerimonas degradans: GOM96_15365
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Entry
GOM96_15365 CDS
T08431
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GOM96_15365 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdeg03400
]
GOM96_15365 (nth)
Enzymes [BR:
sdeg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GOM96_15365 (nth)
DNA repair and recombination proteins [BR:
sdeg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GOM96_15365 (nth)
Prokaryotic type
GOM96_15365 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QGW22317
LinkDB
All DBs
Position
complement(3273301..3273939)
Genome browser
AA seq
212 aa
AA seq
DB search
MNATKRREIFRRLHEDNPEPKTELAYSTPFELLIAVILSAQATDVGVNKATARLFPVANT
PEAIYALGYDGLCEYIKTIGLYPSKAKNVIETCRILVEKHGSQVPDNREDLEALPGVGRK
TANVVLNTAFRQFTMAVDTHIFRVSNRTGIAPGKNVLEVERKLIKFVPKEYLLDAHHWLI
LHGRYVCKARKPQCGSCRIEDLCEYKHKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccacaaaacgccgggagatcttccgacgcctgcacgaagacaaccccgagccc
aagaccgagctggcgtacagcacaccgttcgagctgctgatcgctgtgattctttcggcg
caggcgaccgatgtcggggtgaacaaggccaccgctcggctgtttccggtagccaatacc
ccggaagcgatctacgccctcggctatgacgggctctgcgagtacatcaagaccatcggt
ctgtatccgagcaaggcaaagaacgtcatcgagacctgccggattctggtggaaaagcac
ggcagccaggtgccggacaatcgcgaagacctcgaggcgctgccgggcgtgggtcgcaag
accgccaacgtggtgctcaacacggcctttcgccagttcacgatggcggttgatacgcac
atctttcgcgtcagcaaccgcaccggcatcgcgccaggcaagaacgtgctggaggtcgag
cgcaagctgatcaagttcgtgcccaaggagtatctgctcgacgcccaccactggctgatc
ctgcatggtcgctatgtctgcaaggctcgcaaaccgcagtgtgggagctgtcgtatcgag
gacctgtgcgaatacaagcacaagacctcagacgattga
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