Stutzerimonas degradans: GOM96_16650
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Entry
GOM96_16650 CDS
T08431
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg01501
beta-Lactam resistance
sdeg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GOM96_16650
01503 Cationic antimicrobial peptide (CAMP) resistance
GOM96_16650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdeg03036
]
GOM96_16650
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeg02000
]
GOM96_16650
01504 Antimicrobial resistance genes [BR:
sdeg01504
]
GOM96_16650
Chromosome and associated proteins [BR:
sdeg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GOM96_16650
Transporters [BR:
sdeg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GOM96_16650
Antimicrobial resistance genes [BR:
sdeg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GOM96_16650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
DUF1344
Motif
Other DBs
NCBI-ProteinID:
QGW22566
LinkDB
All DBs
Position
3535523..3536674
Genome browser
AA seq
383 aa
AA seq
DB search
MKHPRKTLREVRLAPLAVLLLLAGCGDKTAEQAAAPVPEVGVYTVQAQPLTLTTDLPGRT
SAYRVAEVRPQVSGILQQRLFTEGSEVKKGQQLYQIDPRTYEARLARAEANLTTAENLAR
RYERLLKTNAVSRQQYDDAQAAWKQAQAEVQVARIDVQYTKVLAPISGRIGRSAVTEGAL
VTNGQAQELATVTQLDPIYVDVNQPITKLLGLRRALESGRLQSSGDNQAEVSLTLDDGSA
YPLPGTLKFSEVSVDPTTGSVTLRAEFPNPDRKLLPGMFVHALLKEGTQQDAILVPQQAV
SRDARGVPSVWVVKPDDSVERREVETLRTVGNAWLIGKGVADGERVVTEGTQRVRSGITV
KPVAASNVRLVAEFAPKTDAVAN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacacccgagaaaaacattgcgtgaggtccggctggcgccactggcggtgctgctc
ctgctggccggctgtggcgataagacggcggaacaggccgcggcgccggtgcccgaggtc
ggcgtctacaccgtgcaggcgcagccgctgacgctgaccaccgacctgccgggtcgcacc
agcgcctaccgggtcgccgaggtgcgcccgcaggtttccggcatcctccagcagcgcctg
ttcaccgagggctcggaggtgaagaaaggccagcagctgtaccagatcgacccgcgcacc
tacgaggcgcgcctggcccgcgccgaagccaacctgaccaccgccgagaacctggcccgc
cgctacgagcgcctgctgaagaccaatgcggtcagccggcagcagtacgacgacgcccag
gccgcctggaagcaggcgcaggcggaagtgcaggtggcacgcatcgacgtgcagtacacc
aaggtgctggcgccgatctccgggcgcatcggccgctcggcagtgaccgagggggcgctg
gtcaccaacggccaggcccaggaactggccaccgtgacccagctcgatccgatctacgtg
gacgtcaaccagccgatcaccaagctgctcggcctgcgccgcgcgctggaatccggccgc
ctgcagagttccggtgacaaccaggccgaggtcagcctgaccctggacgacggcagcgct
tacccgctgccgggcaccctgaagttctccgaagtcagcgtcgacccgaccaccggctcg
gtgacgttgcgcgccgaatttcccaacccggaccgcaagctgctgcccggcatgttcgtg
catgcgctgctcaaggaaggcacccagcaggacgccatcctcgtgccgcagcaggcggtc
agtcgcgatgcgcgcggcgtgcccagcgtctgggtggtcaagccggacgacagcgtcgag
cggcgcgaagtcgagacattgcgcaccgtcggcaatgcctggctgatcggcaagggcgtc
gccgatggcgaacgggtggtcaccgaaggcacgcagcgggtacgcagcggcatcaccgtc
aagccggtggcggccagcaacgtcagactggtcgccgagttcgctccgaagaccgacgcc
gtcgccaactaa
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