Shewanella decolorationis: D0436_00105
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Entry
D0436_00105 CDS
T09167
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18145
membrane fusion protein, multidrug efflux system
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo01501
beta-Lactam resistance
Module
sdeo_M00649
Multidrug resistance, efflux pump AdeABC
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0436_00105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_00105
01504 Antimicrobial resistance genes [BR:
sdeo01504
]
D0436_00105
Transporters [BR:
sdeo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D0436_00105
Antimicrobial resistance genes [BR:
sdeo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AdeABC [MD:
M00649
]
D0436_00105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QDZ88982
UniProt:
A0A5B8QSQ1
LinkDB
All DBs
Position
complement(4994382..4995536)
Genome browser
AA seq
384 aa
AA seq
DB search
MFSKKRHLNLVFLVGIAVMGLMGCDSAEQEENSPSLIQVSVITLDNEALLVTEDLPGRVV
AVRSAEIRAQVSGIVQHRLFEQGSEVTSGTVLFQIDPAQFKADVAIAAAALQRAEAVLVR
SRQETARLASLLKTEAVSQQMFDDAISLRDQAAADVAQSQATLTRRQLDLEFASVKAPIS
GKIDQALVSEGALVSPTDTTPMARIQQIDQVYVDVRLPASMLDNMRQQANEANPELSVEI
LSSSGESLGMKGHILFSGSEVDTGTGDVLLRILVDNPQHRLLPGLFVKARVPKTYYSSTL
RVPQQTVTRKAGQPQVWVLNAEGKVQPMAINVDELVAGRYRVISGLSAGQQIVVEGIERL
SPDAQVHARPWQPTVEQQLSADVR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaaaaacggcatttaaacttggtattcctagtcggaattgccgtaatggga
ttgatgggttgcgactcagcggagcaggaggaaaattccccctctctaattcaggtttct
gtcatcacactggataacgaagcactattggtcactgaagatctacctggtcgcgttgtt
gctgttcgcagtgctgagatccgcgcgcaagttagcggcatagttcaacatcgtctgttc
gaacaaggcagcgaggtaacatctggcacagtgctattccaaattgatcctgcacaattt
aaagccgatgttgctattgcggcggctgccttgcagcgagccgaagccgtattggttcgt
tctcgccaggaaacggcacgcttggcttccctgttaaaaaccgaagcggttagccaacaa
atgtttgatgatgcaatttccctgcgcgatcaagccgcagcagatgtcgcccaatcccaa
gcaacacttacgcggcgccagttagatttagaatttgccagcgttaaagcccctatatca
gggaaaattgatcaagccttagtgagtgaaggagccttagtctcaccgactgataccacc
ccaatggcgaggatccaacaaattgaccaagtgtatgtcgatgttcgactgccagcatca
atgttagacaacatgcgccagcaagcaaacgaagctaacccagagttaagcgtagagatc
ctgagcagcagcggtgagtctcttggcatgaaaggtcatatcttattttcgggctccgag
gtggatacaggtaccggcgatgtactgctgcgtatactcgttgataatccacaacatcgc
ctattgcccggtctttttgtaaaagctcgggttccaaagacttactattcttccactctg
agagtgccacaacagacggtcacccgtaaggcgggtcaaccccaagtatgggtactcaat
gcggagggcaaggtacagcctatggcaattaatgtcgatgagctagtggcaggccgctac
cgcgtgatatcaggactatctgctggccagcagatagtcgttgaaggcatcgaacgccta
agtcctgatgcgcaggttcatgctcggccttggcaacccaccgtagagcagcaactaagt
gccgatgtgcgctga
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