Shewanella decolorationis: D0436_08285
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Entry
D0436_08285 CDS
T09167
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo01501
beta-Lactam resistance
sdeo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0436_08285
01503 Cationic antimicrobial peptide (CAMP) resistance
D0436_08285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdeo03036
]
D0436_08285
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_08285
01504 Antimicrobial resistance genes [BR:
sdeo01504
]
D0436_08285
Chromosome and associated proteins [BR:
sdeo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D0436_08285
Transporters [BR:
sdeo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D0436_08285
Antimicrobial resistance genes [BR:
sdeo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D0436_08285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CFAP143
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
QDZ90468
UniProt:
A0A5B8QWU3
LinkDB
All DBs
Position
3294122..3295135
Genome browser
AA seq
337 aa
AA seq
DB search
MAAISRTLFTLLAFSAFTAQASSLETLEVISKPYANWVTLDANIEAVKAATVSAQTSGRI
VKLNYDVNDVVPEGAALLEITSKEQGAELASYEADLAKATALNVEAQAQYKRYKELFPQG
AISKGAMDEATANAKAAEQAVSAAKARVIKATESLKYTVVSAPFSGIVTERLVELGETVS
VGQPLLSGFSPSQMRAITQVPQRYIQQLKSAPEFLVRLNDGREILSKDLTIFSFADPVSH
SYQVRINLPKDEPNLQPGTWAKALFKNGEREKIQLPTSALITMNELSSVYLKKGEQFVLT
QVRVSEPVNGEVEILAGLKSGDIVAMDAYQVLLQQKQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatctcacgtactctgttcacattattagcattttctgcctttacagcgcag
gcatcttctttagaaaccctcgaagtaataagcaaaccctacgcgaattgggtgacttta
gatgccaatattgaggctgtaaaagcggcaactgtatcagcacaaacctcagggcgaatt
gttaagctcaactacgatgtcaatgatgtcgtacctgaaggtgcggccttactcgagatc
accagtaaagagcaaggcgctgaactggcaagctatgaggccgatctcgccaaagccacc
gcgctaaacgtagaggcgcaggcccaatataaacgctataaagaactcttcccccaaggc
gcgatttcgaaaggcgctatggatgaagcgaccgccaatgcgaaggctgccgaacaagcc
gtgagtgcggctaaggccagagttatcaaggcaactgagtcgcttaaatatactgtagta
tcggccccatttagcgggattgttaccgagcgtttagttgagttgggtgaaaccgtgagt
gtcggtcaaccgctactgtccggtttttcacccagccaaatgcgcgccatcacccaagtg
ccgcagcgctatattcaacagctaaaaagtgctcccgaatttttagtacgcctaaatgat
ggtcgtgaaatcctctctaaggatctcaccatctttagttttgccgatcccgtgagccat
agctatcaagtgcggattaacctgccaaaagatgaacccaacttgcaacccggaacttgg
gccaaggcactatttaaaaatggcgagcgagaaaaaatccagctaccgacttcagcgcta
atcaccatgaatgaactcagtagcgtttacctgaaaaaaggtgagcaatttgtgcttact
caggtacgagtatcagaacctgttaatggtgaagtggaaatactcgcaggacttaaatcc
ggagatattgtcgccatggatgcttaccaagtgttgcttcagcaaaagcaataa
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