Shewanella decolorationis: D0436_16815
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Entry
D0436_16815 CDS
T09167
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo01501
beta-Lactam resistance
sdeo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0436_16815
01503 Cationic antimicrobial peptide (CAMP) resistance
D0436_16815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdeo03036
]
D0436_16815
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_16815
01504 Antimicrobial resistance genes [BR:
sdeo01504
]
D0436_16815
Chromosome and associated proteins [BR:
sdeo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D0436_16815
Transporters [BR:
sdeo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D0436_16815
Antimicrobial resistance genes [BR:
sdeo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D0436_16815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
CusB_dom_1
Myco_arth_vir_N
MBD_C
Motif
Other DBs
NCBI-ProteinID:
QDZ91984
UniProt:
A0A5B8QZW9
LinkDB
All DBs
Position
3668240..3669352
Genome browser
AA seq
370 aa
AA seq
DB search
MKKTIIAIALIAAVATAVSFSDVLQAAKPESAPHLMRTVPVVTGEVVEHPLAQSISLIGK
LAADRAVVIAPQVTGKIKQIAVTSNQAVKKGQLLIELDDMKAQAAVAEANAFLNDETRKL
REFEKLISRNAITQTEIDAQKASVDIARARLASAQADLHYHSLIAPFAGKTGLINFSEGK
MVSIGTELMTLDDLSSMRLDLQVPEHFLSQLSIGMPVSATSRAWPGETFIGKVVAIDPRV
NEETLNLKIRVQFENAKNRLKPGMMMSSTITFPPISAPIVPVQALEYSGTKRYVYVVGED
HIAHRTEVILGARVGDQVLIDSGLKIGDKVVVQGLVNMRDGLKINEVVLEAKNDANRPAA
KSDVNTAETK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccataatagccattgccttaattgctgcggttgctaccgctgtgagtttt
agtgatgtattgcaggcggccaaacccgaaagtgcgccccatttaatgcgtacagtacct
gtagtcacaggagaagtggttgaacatccactggcacaatcaatttcactcataggtaaa
ctcgccgccgatcgcgccgtggttatcgcgccgcaagtcacaggcaaaattaaacaaatc
gccgtgacatctaaccaagcagtcaagaagggccaactgcttatcgagcttgacgatatg
aaagcccaggccgcggtagccgaagccaatgcctttttaaatgatgaaacccgtaaactc
agggaatttgaaaaactcatcagccgtaatgccatcacccaaaccgaaatcgatgcacaa
aaggctagtgtcgatatcgctagagccagactcgcttcggcgcaggcggatttacattac
cattcgctaatcgccccctttgccggcaaaaccggtctgattaacttcagcgaaggtaaa
atggtcagtattggcactgagttgatgaccttggatgatttatccagcatgcgactcgac
ctacaggtgcccgaacattttctatcacagctcagcattggcatgcccgtctcggcgacc
agccgcgcctggccgggggaaacctttatcggcaaagtggtcgccatcgatccccgcgtc
aatgaagaaaccttaaacctgaagatccgcgtgcaatttgaaaacgcgaaaaatcgctta
aagcccggcatgatgatgtcatcgaccatcaccttcccgccaatttccgccccgattgtg
cctgtgcaagccttagaatattcaggtactaagcgctatgtatatgtggtgggtgaggac
catatcgcccatcgcaccgaagtgattttaggcgcccgcgtgggtgaccaagtgcttatc
gattctggtttaaaaattggcgacaaagtggtggtgcaagggctagtgaatatgcgcgat
ggcttaaagatcaatgaagtggtgcttgaagccaagaacgatgctaaccgtccagcagcc
aagtcagacgtcaacaccgcggagactaaataa
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