Shewanella decolorationis: D0436_16855
Help
Entry
D0436_16855 CDS
T09167
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_16855
01504 Antimicrobial resistance genes [BR:
sdeo01504
]
D0436_16855
Transporters [BR:
sdeo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D0436_16855
Antimicrobial resistance genes [BR:
sdeo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
D0436_16855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QDZ91990
UniProt:
A0A5B8QZB6
LinkDB
All DBs
Position
complement(3679345..3682488)
Genome browser
AA seq
1047 aa
AA seq
DB search
MLSQFFIKRPIFAAVLSLLFFITGAIAVWQLPITEYPEVVPPTVVVTANYPGANPKVIAE
TVASPLEQEINGVEDMLYMSSQATSDGRMTLTITFAIGTDVDRAQTQVQSRVDRAMPRLP
QEVQRLGIVTEKSSPDLTMVVHLLSPDNRYDMLYLSNYAALNVKDELARIKGVGAVRLFG
AGEYSLRIWLDPNKVSALGMSPAEIIAAVREQNQQAAAGSLGAQPSGNADFQLLINVKGR
LTELSEFEDIIIKVGQNGEVIRLKDVARVELGATSYALRSLLDNKDAVAIPVFQASGSNA
IQISDDVRAEMARLAKSFPEGLQYEIVYDPTVFVRGSIEAVIKTLLEAVLLVVLVVVLFL
QTWRASIIPLVAVPVSLVGTFAFMHLMGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN
IASGLSPIAATQKAMKEVTGPIVATTLVLAAVFIPTAFMSGLTGQFYKQFALTITISTFI
SAINSLTLSPALSALLLKGHDAPKDALTRLMDKLFGGWLFTPFNRLFNRASEGYGYLVRK
VIRFGGIIGLVYLGMVALTGVQFVNTPTGYVPGQDKQYLVAFAQLPDAASLERTDAVIKK
MSDIALNHPGVAHSIAFPGLSINGFTNSPNSGVVFVALDDFELRKRPELSANAIAGQLNQ
QFAAIQDAFIAIFPPPPVQGLGTIGGFRLQIQDRANLGYEALYQVTQQVMYKAWADPQLA
GIFSSYQVNVPQLELDIDRTKAKQQAVSLDQIFQTLQTYMGSTYVNDFNRFGRTYQVNMQ
ADEAFRQSPQQISQLKVPNMNGDMIPLGSFINVSQSAGPDRVMHYNGFTTAEINGGPAPG
VSSGQAQAAIEKILAETLPIGMTYEWTELTYQQILAGNTGLLVFPLVILLVFMVLAAQYE
SLSLPLAIILIIPMTLLSALSGVLIYGGDNNIFTQIGLIVLVGLATKNAILIVEFAKEKQ
DHGMEVMDSILEAARLRLRPILMTSIAFIMGVVPMVFSTGAGAEMRQAMGVAVFAGMIGV
TLFGLILTPLFYYALAKRGRRKTVTTV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcagttttttattaaaagaccgatatttgcagccgttctctcgctgctattt
tttatcacaggggcgattgctgtctggcaattacctattaccgaataccctgaagtggta
ccaccgacagtcgtggtgaccgccaattatcctggcgctaaccctaaagtcattgccgaa
acggttgcctcgcccttagaacaggaaatcaacggcgtcgaagacatgctgtatatgtca
tcgcaggcgacatccgatgggcgcatgaccttgaccatcacctttgccattggcaccgat
gtggacagggcgcaaacccaagtgcagagccgggttgaccgtgctatgccacgtttacca
caggaggttcaacgcctcgggattgtgaccgaaaagtcctcgcccgacttaaccatggtg
gtgcatttactgtcgccggataaccgttatgacatgttgtatttgtctaactacgcggcg
ctcaacgtaaaagatgagttagcacgtatcaaaggcgtgggcgcggtgcgtttattcggt
gcgggcgaatatagtctgcggatctggcttgacccgaataaagtctcggcgcttggcatg
tcgccagctgaaattattgccgccgtacgtgagcaaaatcagcaagcggcagcgggcagt
ttaggggcacagcctagtggtaatgccgacttccaactcttgatcaacgttaagggtcgt
ctgaccgaactgtcagaattcgaagacattattatcaaggtcggtcaaaacggtgaagtg
atccgtcttaaggatgtcgctcgtgtcgaactcggtgcaactagctatgcgctgcggtca
ttgctggataacaaggatgcggtcgcgatccccgtgttccaagcatcgggctcgaatgcg
attcaaatctccgacgatgtgcgcgccgaaatggcaagactggctaagtctttccccgaa
gggctgcaatacgagattgtgtacgatccgactgtgtttgtgcgtggctcgattgaagct
gtgattaaaactttacttgaagccgtgctcttagtggtactcgtggtggtgctgttcctg
caaacttggcgcgcctcgattattccgctggtggccgtgcctgtgtctttggtgggaacc
ttcgcctttatgcacttgatgggcttctcgcttaatgcgctgtcgctgtttggtctggtg
ctggccatcgggattgtggtcgacgatgccattgtggtggtagaaaacgtcgagcgaaat
atcgcttcgggtttaagcccaattgccgcaacacaaaaagccatgaaggaagtgactggg
ccgattgtggcaaccactttagtgttggccgcggtgtttattcctaccgcctttatgagc
ggattaacggggcagttttataaacagtttgcgctgactatcacgatttcgacctttatt
tcggccattaactcgctcaccttgagcccagcgttatcggcgttgttactcaagggccat
gatgcgcctaaggatgcgctcacacggttaatggataagctgtttggtggctggttattt
acgccattcaatcgcttattcaaccgtgcctcagaaggttatggctatttagtgcgtaag
gtgatccgttttggcggcattatcggactggtttatctgggcatggttgcgctgacgggt
gtgcaatttgtgaatactccaacgggttatgtgccaggacaggataaacagtatttagtg
gcatttgcccaattaccggatgcggcctcactcgagcgtaccgatgcggtgatcaagaaa
atgtccgacatcgccttgaatcaccccggtgtggcgcactctattgccttccccggtctg
agtatcaacggttttaccaatagtcctaactcgggcgtggtgtttgttgccctagatgat
tttgagttacgtaagcgtcctgaactgtcggcgaatgcgattgccggccaattaaatcag
cagtttgctgctattcaggatgcatttattgccatcttcccgccgccacctgtgcaaggc
ctcggcactattggagggttccgtctgcaaattcaagacagagccaaccttggttatgag
gccttgtatcaggtgacccaacaagtaatgtacaaggcgtgggccgatccacaattagcg
gggattttctccagctatcaagtgaacgtgccacaacttgaactggatatcgatcgaact
aaagcgaaacagcaggcagtgtcgctcgatcaaattttccagacattacaaacctatatg
ggctcgacctatgtcaacgacttcaatcgtttcggtcgaacctatcaggtgaatatgcag
gccgacgaagcattccgtcaaagcccgcagcagatcagtcagctaaaagtgcctaatatg
aatggcgatatgatcccactcggctcctttatcaatgtgagccagagtgcggggcccgat
cgcgtgatgcactataacggtttcaccacggccgagattaacggtggcccagcacccggt
gtgagttcgggccaagcgcaggctgcgattgagaaaatcctcgccgagactttgccgata
ggcatgacctacgagtggactgagctgacctatcagcagatcctcgccggtaacacaggc
ttgttagtgttccctctggtgatcctgctggtatttatggtgttggcggcgcagtacgag
agtttgagtttgccattggcgattatcttaatcattccaatgaccttactctcagcgctc
agtggtgtgcttatttatggcggtgataataatattttcacccagattggtcttatcgtc
ctcgtgggcttagcgaccaagaacgcgattctgattgtcgaatttgccaaggaaaaacaa
gaccatggtatggaagtcatggattcgattctcgaggcggcgcgcttacgtttacgcccc
atcttgatgacctctatcgcctttatcatgggggtggtgcccatggtgttctcaaccgga
gcgggcgctgaaatgcgtcaagctatgggcgtcgcggtatttgccggtatgataggggtg
acgttgtttggtttgatcctgacgccattgttctactatgcgttagctaaacgtggtcgt
cgtaaaaccgtgacgactgtttaa
DBGET
integrated database retrieval system
