Shewanella decolorationis: D0436_17915
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Entry
D0436_17915 CDS
T09167
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeo03009
]
D0436_17915 (rlmC)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
D0436_17915 (rlmC)
Ribosome biogenesis [BR:
sdeo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D0436_17915 (rlmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
MTS
Cons_hypoth95
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QDZ92179
UniProt:
A0A5B8R1S0
LinkDB
All DBs
Position
complement(3919691..3920845)
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AA seq
384 aa
AA seq
DB search
MSTLVQCGYFERGQCQSCRHIKLPMAQQLAAKTQELQQLLAPFVDNAEPQFLPPVVGDSS
GFRNKAKMVALGAAHVPVLGIVSPSGEAVSLCDCLLYPADMQALLHRLERFVQQAGIPPY
RVDKAKGELKFILLTRSQVRGEYMLRFVLRSRDAIARIERELPTLMAEYPQIKVISVNLQ
PVHMAILEGEEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVADFA
PASLWDLFCGVGGFGLHCASKNIPLIGIEIEAEAITCAKMSAQLMGLDKVEFMALDSTDF
AKGEAAQTKPELIIVNPPRRGIGESLCHSLSEFAPKAILYSSCNPKTLAKDLGHIRGYRL
TKVQLFDLFPHSDHFEVLALLVKD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacattagtacaatgtgggtattttgaacgaggccaatgccaatcctgtcgccat
attaagctccctatggcgcagcaactggcggctaaaacccaagaattgcagcaattgtta
gcgccttttgtcgataacgccgaaccacagtttttacctccagttgtgggtgacagcagc
ggttttcgtaacaaggcgaaaatggtcgctttgggcgctgcacatgtgcctgtgttgggg
attgttagccccagcggcgaggcggtgagcctgtgtgactgtctgttgtatcctgctgat
atgcaagccttactccaccgtttagagcgctttgtgcagcaagcgggcattccgccttac
cgtgtagataaagccaagggcgagcttaaatttatcctactgacgcgcagccaagtgcgt
ggcgagtatatgctgcggtttgtgctgcgctcgcgggatgccatcgcccgtattgagcgt
gaattgcctacgctgatggcggaatatccgcagatcaaagtcatctccgtcaatttgcaa
cctgttcatatggctatcttggaaggtgaagaggagattttcctcaccgaaaatactcgc
ctcgaagagcgctttaacgatgtgcctttgtttattcgtcccaagagcttttttcaaacc
aatccgcaggtggcggcaaagctgtatcaaaccgcccgtgagtgggtggccgacttcgcg
ccagcttccctttgggacttattctgtggtgtgggcggctttggtttgcactgtgctagc
aaaaacatcccactgatagggattgaaattgaagccgaggctattacctgcgctaagatg
tcggcgcagttgatgggattggataaagtagagtttatggcgctcgattccaccgacttt
gccaagggcgaggcggcgcaaactaagccagagttgattattgtcaatccaccgcgtcgc
gggattggtgagtccctgtgtcattccttaagtgagtttgcgcctaaggcgattttgtat
tccagctgcaatcctaaaaccttagccaaagatctcggccatatccgtggctatcggtta
actaaggtgcagttattcgatctctttcctcactcggatcatttcgaagtgttagctcta
ttagtgaaagactaa
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