Shewanella decolorationis: D0436_20080
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Entry
D0436_20080 CDS
T09167
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00540
Lipopolysaccharide biosynthesis
sdeo01100
Metabolic pathways
Module
sdeo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
D0436_20080 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sdeo01005
]
D0436_20080 (lpxC)
Enzymes [BR:
sdeo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
D0436_20080 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
sdeo01005
]
Lipid A
D0436_20080 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QDZ92572
LinkDB
All DBs
Position
620710..621630
Genome browser
AA seq
306 aa
AA seq
DB search
MIFQRTVQKMVKATGVGLHSGNKVTLSIMPAPVNTGIVLVRTDMNPAVAIPAKAEQVRET
TMCTALVNDEGIRISTIEHLFAALAGLGIDNAVIEVDAPEIPIMDGSASPFVFLLQSAGI
KEQAAPKKYLKIKRPVRVEDGDKWAELKPFKGFRVNFKIDFAHPEIARSQQHVVMDFSTS
AFVKDISRARTFGFMRDIEYLRANNLALGGSMENAVVLDEYRVLNPDGLRYEDEFVKHKI
LDAFGDLYVAGHAILGEFTAYKTGHALNNQLVRALLAQQDAWELVSFEKEADVPVSFTVP
GGAVYA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcaaagaactgttcaaaaaatggtgaaggctactggagtcggtttgcactct
gggaacaaggtcaccttgagcattatgcccgcaccagtcaatacagggatcgtactcgtg
cgtaccgacatgaatcctgccgttgctattccagcaaaggcggaacaagttcgcgaaacc
actatgtgcacggcacttgtcaatgacgaaggtattcgtatttcgactattgagcattta
tttgcagccttagcgggtttaggcattgataacgccgtaatcgaagtggacgcgcctgaa
atcccaattatggatggcagtgcgagcccatttgtcttcttacttcagtctgcgggtatc
aaagagcaggctgcgcctaagaagtacttaaagattaaacgccctgtgcgtgttgaagac
ggtgataagtgggccgagctgaagccattcaaaggctttagagtcaacttcaaaattgac
tttgctcaccctgaaattgcccgtagtcaacagcatgtggtgatggacttctctacttct
gcttttgttaaagacattagccgtgcccgtacttttggttttatgcgtgatattgagtat
ctgcgtgcgaacaacctagcattaggtggcagcatggaaaacgcggttgtacttgatgaa
tatcgcgtcctcaaccccgacggcctgcgttatgaggatgagttcgttaagcacaaaatt
ttagatgcgtttggtgatctctacgtggcaggacacgccattcttggtgagtttactgcc
tataaaacgggtcatgcactgaataaccaattagtgcgagccttattggcacagcaggat
gcatgggagctggtgagctttgagaaagaagccgatgttcccgtcagctttactgtgcca
ggtggcgcggtttacgcttaa
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