Sulfurimonas diazotrophicus: WCY31_11695
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Entry
WCY31_11695 CDS
T11008
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sdiz Sulfurimonas diazotrophicus
Pathway
sdiz00300
Lysine biosynthesis
sdiz00550
Peptidoglycan biosynthesis
sdiz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WCY31_11695
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WCY31_11695
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdiz01011
]
WCY31_11695
Enzymes [BR:
sdiz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
WCY31_11695
Peptidoglycan biosynthesis and degradation proteins [BR:
sdiz01011
]
Precursor biosynthesis
Amino acid ligase
WCY31_11695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
DapB_N
Motif
Other DBs
NCBI-ProteinID:
XAU14893
UniProt:
A0ABZ3H9X3
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All DBs
Position
complement(2296705..2298000)
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AA seq
431 aa
AA seq
DB search
MKIALPDQPFRFVTENSAECDAETAFVLTGLNRRYLDDAKARGAHSIISPADVAPLFGLD
RINVIGITGTNGKTTTASAIYSILLDLGHKAAMQGTRGFFMNDTVVEGKSLTTPTLLETY
RHIYQAVAAGCEYFVMEVSSHAIVQARAEGIDFALKILTNITQDHLDYHETLEEYVRVKN
SFFADEGKKLINKDEAKADFNIKNAFTYGAENPATYKVVAYSLNDGISAVVQHFGKIHTF
HSPMHGFFNVYNLTAAVAAVHLVTGDDLEAVCDAVGGFAGVSGRMEVVSESPLVIVDFAH
TPDGMAQVLNALKEKEMLVVFGAGGDRDRSKRPLMGRVAENLAKKVFVTSDNPRSEDPDA
IIADILGGMTYPEKAVVEPNRKAAIAMALSARSGDEVVVVLGKGDEQYQIIYDKQFPFDD
REVIRSLLSEV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatagcgcttcctgatcaaccgttccgttttgtaacggaaaactccgcagagtgc
gacgccgaaacggcgttcgtcctcacgggcctcaaccgccgctaccttgacgatgccaag
gcgcgcggtgcgcactccatcatctcccccgccgacgtcgctcccctgttcggacttgac
cgcatcaacgtgatcgggattaccggcaccaacggcaagacgacgacggcgagcgccatc
tactccatcctgctggaccttggtcacaaagcggcgatgcaggggacccgcggttttttc
atgaacgacaccgtcgtggagggcaaaagcctgacgacgccgacgctgctggagacctat
cgccacatctaccaggcggtggcagcagggtgcgaatacttcgtcatggaagtgagctcc
catgcgatcgtccaggcgcgggcagaggggatcgatttcgcgctgaagatcctcaccaat
atcacccaggaccatcttgattatcatgagacgctcgaggagtacgtccgcgtcaagaac
agcttctttgccgatgaagggaaaaagctgatcaacaaggacgaggcaaaggcggacttc
aacatcaaaaacgcttttacctacggggccgagaacccggcgacctacaaggtggtggcc
tattcgctcaatgacggcatcagcgccgttgtgcagcatttcggcaagatacacaccttc
cacagtccgatgcacggattcttcaacgtctacaacctcaccgcagccgtggcagcggtc
cacctcgttaccggcgacgatctcgaagccgtgtgcgacgcggtcggcggttttgccggg
gtgagcggacggatggaagtggtgagcgaatctcctttggttatcgtcgatttcgcccac
actccggacggtatggcgcaggtcctcaatgccctcaaagagaaggagatgctggtcgtc
ttcggggcagggggcgaccgcgaccgctccaaacgtccgctgatgggacgggtggcggag
aacctcgccaagaaggtcttcgtcaccagcgacaacccccgcagcgaggaccccgatgcg
atcatcgcggacatcctgggcggcatgacctatccggagaaggccgtggtcgaaccaaac
cgcaaagcggcgatcgccatggcgctgagtgcgcgcagcggcgacgaggtcgtcgtcgtg
ctcggcaagggcgacgagcagtatcagatcatctacgacaagcagttcccttttgacgat
cgcgaggtcattcgttctctgttaagtgaggtttga
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