KEGG   Sphingobacterium daejeonense: NCTC13534_04720
Entry
NCTC13534_04720   CDS       T06632                                 
Symbol
pdg
Name
(GenBank) UV-endonuclease
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
sdj  Sphingobacterium daejeonense
Pathway
sdj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sdj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NCTC13534_04720 (pdg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdj03400]
    NCTC13534_04720 (pdg)
Enzymes [BR:sdj01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     NCTC13534_04720 (pdg)
DNA repair and recombination proteins [BR:sdj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NCTC13534_04720 (pdg)
 Prokaryotic type
     NCTC13534_04720 (pdg)
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 RecR_HhH DUF763 HHH_8 Ogg-HhH DUF2400
Other DBs
NCBI-ProteinID: VTQ05197
LinkDB
Position
1:3919500..3919982
AA seq 160 aa
MSMLIKERYKAFVEYFSTHNPEAQTELNYGNPFELLIAVILSAQCTDKRINQITPALFER
YPDPESLANSSVEEVFSYIRSVSYPNNKAKHLVGMAQKLLSEFNGEIPEKVEDLVKLPGV
GRKTANVISSVVYHKPAMAVDTHVFRVAARIGLTNRATTP
NT seq 483 nt   +upstreamnt  +downstreamnt
ttgtctatgctgataaaagaacgttataaggcttttgttgagtatttctctacccacaac
cctgaagctcagactgaattaaactatggtaatcccttcgaattgctaatcgctgtaatt
ctgtctgctcaatgcaccgataaaagaataaatcaaattacaccagcactctttgaaaga
tatccagatcctgaatccctagcaaacagctccgtggaggaagtattcagttatatccgt
tcagtcagctatccaaacaataaggctaagcatcttgttggaatggcacaaaaattattg
agcgaattcaatggagaaatcccagaaaaagtagaagaccttgttaaattgccaggggtt
ggtagaaaaactgcaaatgtaatatcatcagtcgtttatcataagccggcaatggcagtc
gatacgcatgtgtttcgggtagcagcgagaatagggcttaccaatagagcaaccacaccc
tag

DBGET integrated database retrieval system