Shewanella dokdonensis: KHX94_00740
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Entry
KHX94_00740 CDS
T07469
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00270
Cysteine and methionine metabolism
sdk00450
Selenocompound metabolism
sdk01100
Metabolic pathways
sdk01110
Biosynthesis of secondary metabolites
sdk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
KHX94_00740
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
KHX94_00740
Enzymes [BR:
sdk01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
KHX94_00740
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DUF4350
Motif
Other DBs
NCBI-ProteinID:
QVK23374
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Position
141286..142464
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AA seq
392 aa
AA seq
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MKRATKIVSLGRDKKWTKGVINPPVVRASTVVFDSLEHLAKATAGRGKGELFYGRRGTDT
HFALQAAIAELEGGVGTALYPSGAAAISGALLSFLKSGDHLLMVDSAYEPTRDLCDKLLA
GLGIETTYYDPMIGAEIANLIRPNTKVLYLESPGSITMEVQDVPTLCQIAHQHGLVAMLD
NTWSSPINCRPFELGVDISIQAATKYIVGHSDVMMGTATANEQHWEQLRENSYLLGQCVS
ADDAYLALRGLRTLGVRMAQQEKNALEIAHWLETRPEVDHIRHPAFPSCPGHEFFKRDYL
GSNGLFSFVLKTGNRQAMKAFVEGMQHFKMGFSWGGYESLIVAEFGVDKIRTVTHWDSSK
PMFRLHIGLEDTEDLIADLEAAFARYHEALSN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagctactaaaattgtgtccctaggccgggacaaaaaatggaccaaaggtgtg
attaacccgcctgtcgtccgcgcctcaaccgttgtttttgatagtctggaacaccttgcc
aaggccactgctggcagaggtaaaggtgaattgttttatggccgcagaggcacagacacc
cactttgccctgcaagcagccattgcggaactcgaaggcggtgttggtaccgcgctctac
ccttccggtgcagcggccatcagtggcgcactgttatccttcctgaaaagtggtgaccat
ctgctgatggttgacagtgcttatgaaccaacccgcgacctctgcgacaaactgttggca
ggattgggcattgaaaccacctactacgacccgatgattggcgctgaaatcgctaacctt
atccgcccgaacacaaaagtgctgtatctggaatctcccggttctatcaccatggaagtg
caggatgtgccaacgttatgccaaatagcccatcaacatgggctggttgctatgctggat
aacacctggtcatcgcccatcaattgccgcccgtttgaattaggcgttgatatctcgatt
caagctgccaccaaatatattgtcggccattcagatgtcatgatggggaccgccaccgct
aatgaacagcattgggaacagctacgggaaaacagctacctgcttggccagtgtgtctcc
gcagacgatgcctacctagcactgcgtggcctgcggacattaggcgtgcgcatggcgcaa
caagagaaaaatgcgctggagattgctcactggttggaaactcgtccagaggttgaccat
atccgccaccccgcttttccctcctgccctggtcatgagtttttcaaacgtgactatctc
ggcagtaacggcctgttttcgtttgtattgaaaaccggaaaccgccaagcgatgaaggct
tttgtcgaagggatgcagcatttcaaaatgggcttttcctggggcggctatgaaagcctg
atcgttgccgagtttggtgttgataaaattcgcacagtgacccattgggacagcagtaaa
cctatgttccggctgcatattggtctggaagataccgaagatctcatcgctgatttagaa
gccgcatttgcccgttatcacgaggcattatccaactga
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