Shewanella dokdonensis: KHX94_01815
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Entry
KHX94_01815 CDS
T07469
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sdk
Shewanella dokdonensis
Pathway
sdk01501
beta-Lactam resistance
sdk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KHX94_01815
01503 Cationic antimicrobial peptide (CAMP) resistance
KHX94_01815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_01815
01504 Antimicrobial resistance genes [BR:
sdk01504
]
KHX94_01815
Transporters [BR:
sdk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KHX94_01815
Antimicrobial resistance genes [BR:
sdk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KHX94_01815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QVK23533
LinkDB
All DBs
Position
384264..387527
Genome browser
AA seq
1087 aa
AA seq
DB search
MSMIDTSVKRPVTVWMFMLAIILFGMVGFSRLAVKLLPDLSYPTLTIRTQYNGAAPVEVE
QLVSKPIEEAVGIVKGLRKISSVSRSGTSDVALEFEWGTNMDLAGLEVREKLDTIELPLD
IDKPVLLRFNPNLDPIMRLALPAKDGSEAELKRLRTYAEEELKRELETLPGVASVRLSGG
LEQEIHILLNQQKLSQLNLSSELIKQRIAEENINLSAGKVVQGDKEYLVRTVNQFRNLSE
LANIIVYKNGTTLVRLGDIAQVTDGFKERSDITRIGGKESIELALYKEGDANTVAVAQKV
RQQLQRMQVQAAKTGAPVPEVIYDQSEFIESAVSEVTSSALIGSLLAMLVIYLFLRDIIP
TLIISISIPFSVIATFNMMYFAGLSLNIMSLGGIALAVGLLVDNAIVVLENIDRCKASGM
NRLDAAVTGTREVAGAITASTLTTLAVFVPLIFVDGIAGALFKDQALTVTFALLASLLVA
LTSIPMLASREGFKTLPPLVKHLPKPLPASRWGKVRYYSATVFALPFTLLLNWLPRALMT
VSLLLLRLCSWLAGLVMRPLSAVFNAGYRLLAHVYQPLLNSALQHKALTITIALLFTASA
GLLVNRLGMQLIPPMNQGEFYVEILLPPGTEVSHTDKVLQQLASVISDDKAVKHAYSQAG
SGGLMTSDTSRGGENWGRLQVVLADHHAFNEVAAKLRARAKTIPELEANIKFPELFSFKT
PLEIELSGYELGPLKQSADALVKALGTDPRFTDINSTLRDGQPEISIRFDHARIAALGMD
APTIAARIAQRVGGTVASKYTLRERKIDILVRSEADERRQISDIGAMLINPDSTHPLPLS
AVADVELTLGPSAINRISQQRVAIVSANLAYGDLNQAVANARQLLAKVPMSASVQTRFGG
QNEEMESSFTSLKIALLLAVFLVYIVMASQFESLLHPLLILMAVPMALSGSIYGLWLTGS
QLSVIVFIGLIMLAGIVVNNAIVLVDRINQQRAAGVEKLTAIREAAASRLRPILMTTLTT
TLGLLPMAIGLGDGAEVRAPMAITVIFGLSLSTLLTLVVIPVLYALFDRKTYEASADPAA
KITGAQA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgattgacacttcggtgaaacgtccagtcaccgtctggatgtttatgctggct
attatcttatttgggatggtgggattctcccggctagccgtgaagctgctgccggactta
agttaccctaccctcactatccgtacgcaatacaatggcgcggcgccagtagaagttgag
cagctggtaagcaaaccgattgaagaagccgtagggattgttaaaggtctgcgcaagatc
agttcagtatcccgttccggcacctcagatgtcgcgttggaatttgaatggggcaccaat
atggatctcgctggactggaagtccgtgaaaagctcgataccatagaactgccactggat
atagacaaaccggtactgttacgttttaaccccaacctcgaccccatcatgcgtctggca
ttaccggcgaaagatggcagtgaagcagaactgaaacgactgcgcacttacgccgaagag
gagctaaagcgcgagctggaaaccctgcccggcgtggcatcggttcgtttgtcgggtgga
ctggaacaggaaatccacattctgttaaaccagcagaaactgtcacagttaaacctgagc
agcgaactcattaaacagcgtattgctgaagaaaatatcaacctgtctgccgggaaagtg
gttcagggtgacaaagagtatctggtaagaacagttaaccaattccgtaacctcagcgaa
ttagccaacattatcgtctataaaaatggcacaaccttagtgcgcttaggagatattgcc
caggtgactgatggctttaaagagcgttcggacatcacccgtattggcggtaaagaatcc
attgaactggcgctttacaaagaaggggatgccaatacagttgcggttgctcagaaggta
cggcaacaactgcaacggatgcaggtgcaagcggccaaaaccggcgcgccagtaccggaa
gtgatctacgatcaatcggaatttattgaaagcgccgtcagtgaagtcacctcctccgcg
ttaatcggcagcctgctggcgatgttggtgatctacctgtttctgcgagacatcatcccc
acactgatcatctctatctccattccattttccgtcatcgccacctttaacatgatgtat
tttgccggactcagcctgaacattatgtcactgggcggcatcgcactggcggtaggatta
ttggtggataacgctattgtggtactggaaaacatcgaccgttgtaaagcaagcggcatg
aaccggcttgatgctgccgtgaccggaacccgtgaagtggccggcgcgatcaccgcatcg
acactgaccacgttggcggtgtttgtccccttgatttttgtggatggtattgccggagcc
ctgttcaaggatcaagcactcaccgtcacctttgcgttattagcctcactgttggtggca
ctgacctcaattccaatgctggcttcccgcgaaggtttcaaaacattaccgcccttggtt
aaacacctgcctaaaccgcttcctgccagtcgctggggaaaagtccgctattacagcgct
accgtctttgccctgccgttcacgctgttgttgaactggctgccaagagcgctgatgaca
gttagtttgctgctgctaagattgtgcagttggttagcgggtttagtgatgcggccactg
tcagcagtattcaacgctggttatcggttgttagcccatgtttatcaacctctgctaaac
agtgcgttacagcacaaagctttaacgataacgattgcgctgctgtttaccgcatcagca
ggcttgctggtaaaccgcctaggcatgcagttgatcccaccgatgaatcaaggcgaattc
tatgtagaaatcttgctgccgccaggcactgaagtcagccataccgataaagtgttgcag
caactggcatccgttatcagcgacgataaagcggtaaaacatgcctacagccaagcgggc
agtggcggcttgatgacctcagacaccagtcgcggcggcgagaactgggggcgattacag
gtggtgttggccgatcaccatgcctttaatgaagttgccgccaaactgagagcccgcgct
aaaaccatcccggaactggaagctaatatcaagtttccagaattattcagcttcaagaca
ccgctggaaatcgaactcagtggctatgaacttgggccattaaaacaaagcgctgatgcg
ttggtaaaagcattgggaacagacccgcgctttaccgacatcaacagcacgctgcgtgat
ggtcagccggagatcagtatccgttttgatcatgcccgtattgcagcactgggcatggac
gcccccacgattgccgcgcgaattgcccaacgtgtaggtggcacagtcgccagtaaatat
accctgcgcgaacgtaaaatcgacattctggtacgcagcgaggcagacgagcgacggcag
ataagtgatatcggcgccatgctgatcaaccccgacagcacccaccctctgccattaagt
gcggtcgccgatgtggaactgacgctcggcccctcagcgattaaccgcatcagtcaacag
cgggtcgcgattgtctctgccaacctggcttatggcgatcttaatcaagcggttgccaat
gcccgccagttactggcaaaagtgcctatgtcagcctcagtgcaaactcgcttcggcggt
caaaatgaagagatggaaagctccttcacttcactaaagattgccctgttgctggcggta
tttctggtgtacatcgttatggccagccagtttgaatccttgctgcatccgctattgatc
ctgatggcggttcccatggcgctgagcggcagtatctatggtctgtggctgaccggcagt
caactgtctgtcattgtctttattggtctgatcatgttggcggggatcgtggtcaacaac
gccattgtgctggtcgatcgcatcaaccagcaacgtgcagccggcgttgaaaaactcacc
gcaatccgcgaggccgcagcatcgcgattacggccaatcctaatgactactttgaccact
acactgggattgctgccgatggcaatcggtttaggtgatggtgcagaagtccgtgcgcct
atggccattaccgtgatctttggtctgagcctctcgaccctgctgaccttagtggtcatt
ccggtgttgtacgccctgtttgaccgtaaaacttacgaggcgagtgctgatccagccgcc
aagatcacaggagcgcaagcatga
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