Shewanella dokdonensis: KHX94_06375
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Entry
KHX94_06375 CDS
T07469
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sdk
Shewanella dokdonensis
Pathway
sdk01501
beta-Lactam resistance
sdk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KHX94_06375
01503 Cationic antimicrobial peptide (CAMP) resistance
KHX94_06375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdk03036
]
KHX94_06375
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_06375
01504 Antimicrobial resistance genes [BR:
sdk01504
]
KHX94_06375
Chromosome and associated proteins [BR:
sdk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KHX94_06375
Transporters [BR:
sdk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KHX94_06375
Antimicrobial resistance genes [BR:
sdk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KHX94_06375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QVK24765
LinkDB
All DBs
Position
complement(1320961..1322100)
Genome browser
AA seq
379 aa
AA seq
DB search
MKTITLLSLTLLLTGTLTACQEQHKPAATDPTVGVVKVTQQVLPLTLMLQGRTVASLSAE
VRPQVGGIIQQRLFTEGAKVNAGDVLYQIDAASYAATYAKAEADLRTALATQEAARLKDQ
RYQALLQDKSVSHQDAEDAHAAFMEADASVAGYQAALQSARIDLERTKITAPISGYIGIS
NVTPGALVSAAQTTALTTINTLDPMNVDLNESSKDLLELRKMLSRAGVVKGNANVSLILE
DGSEYPYEGQLKVREVSVDRSTGSVVLRAQFANPDDILLPGMFVRAKLAVAVDQHGIKVP
QQGISRDNQGHAYALVVDKDGKIAKKMVTTEQAIGDQWVISGGLAAGDMLVVEGSNKVRV
GQTVKAETVALDTTGKEGR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ataaaaacaataacactgctatcactcaccttgctacttactggcacattgactgcctgt
caggaacaacataaacctgcggcaaccgaccctaccgtcggggtcgtgaaagtgacccaa
caagtactgccattgacccttatgttacaggggcgaaccgtggcttcgttgagcgctgag
gtgaggccacaagtgggcggtattattcagcagcggctgtttaccgaaggcgccaaagtt
aatgcgggtgacgtactgtaccagatagatgccgcctcatatgccgccacttatgctaaa
gcggaggctgatttacgtacggcactggcaacgcaggaagcggcaagactaaaagatcag
cgttatcaggcattgctgcaagacaagagcgtttcccatcaagacgctgaagacgctcat
gctgcgttcatggaagctgatgccagtgtcgcgggttaccaagcggccttacaaagcgcc
cggattgatttagaacgtactaaaattaccgcacccatcagcggttatatcggcatctca
aatgtcacgcccggtgctttggtcagtgcagctcaaaccacggcgctgacgaccatcaat
acgctggatcccatgaatgttgacctgaatgaatccagtaaggatttgctggaactgcgc
aaaatgttgtctcgcgccggggtggttaaaggcaatgccaacgtcagtttgattcttgaa
gatggttccgaatacccgtacgaggggcaactgaaagtccgggaagtctcggttgatcgt
tccactggttccgtagtgctacgggcacagtttgctaatcctgatgatattttactgccc
gggatgtttgtccgcgccaaactggcagtggcggttgatcagcatggcatcaaggtgcca
cagcaagggatctcccgcgataatcaggggcatgcctacgccttggtggtggacaaggac
ggcaaaatcgctaagaagatggtgacaacggaacaggctatcggcgatcagtgggtgatc
tctggcgggttagcggcgggcgatatgctggtggttgaaggctccaataaagtcagagtc
ggtcagaccgtcaaggctgaaactgtggcgcttgacacaactggcaaggaaggacgctaa
DBGET
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