Shewanella dokdonensis: KHX94_17055
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Entry
KHX94_17055 CDS
T07469
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sdk
Shewanella dokdonensis
Pathway
sdk01501
beta-Lactam resistance
sdk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KHX94_17055
01503 Cationic antimicrobial peptide (CAMP) resistance
KHX94_17055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdk03036
]
KHX94_17055
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_17055
01504 Antimicrobial resistance genes [BR:
sdk01504
]
KHX94_17055
Chromosome and associated proteins [BR:
sdk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KHX94_17055
Transporters [BR:
sdk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KHX94_17055
Antimicrobial resistance genes [BR:
sdk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KHX94_17055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
NQRA_N
DUF11
Motif
Other DBs
NCBI-ProteinID:
QVK24923
LinkDB
All DBs
Position
complement(3545667..3546668)
Genome browser
AA seq
333 aa
AA seq
DB search
MVGLGLAVSPALHAANDVATITVATQKAPHMLVLDGTLEAVKSATVSAQTNGRIVKLNFD
VNDLVPAGASLLEITSKEQGASLAAAEADYARAQALNVEAQKTLERYQKLFPQGAISKGA
MDQAIANAKSTQQAASAASAQITKARESLKYTVVSAPYSGVVTARHVEEGETVSPGQALL
SGYATDKMRAVIQVPQRYRDALINAGAVDVVLADGRQFHVSNPVIFGFTDTQSHAYKVRL
PLPENTPALLPGSWIKARFPVDEREITLIPQSALYSVNELSGVYLQQGDKFVLQQVRLGE
TRGNNVEVLAGLQAGDVIAANAYQILLTHPVQQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtggggttaggactggctgtcagcccggcgctgcacgcagcaaatgatgtggccact
atcacggtggcaacgcaaaaagcgccgcatatgctggtgctggatggtacgctggaagcc
gtaaaatcagccacagtttctgcacagaccaacggtcgcattgtaaaactcaattttgac
gtgaacgatctggtgcctgcgggagcctcgctgctggagatcaccagcaaagagcaaggc
gcatcgctggccgccgctgaagccgactacgcccgggcacaagcgttaaatgtagaagcg
caaaaaacattagagcgttaccaaaaactgtttcctcagggggccatttccaaaggcgcg
atggatcaagcgattgccaatgccaaatccacccagcaagcagccagtgccgccagcgcc
cagatcaccaaagcccgtgaatcattgaaatataccgtggtttcagcgccctattcaggt
gtagtgaccgcgcgtcacgttgaagaaggggaaaccgttagccctgggcaagcgctactt
tcaggctatgccaccgacaaaatgcgggcggttatccaagtgccgcagcgttaccgtgat
gccctgattaacgccggggcagtagatgtagtactggcagatggtcggcagttccatgtc
agtaaccccgtcatttttggttttaccgacacccaaagccatgcttataaagtccggcta
ccactaccagaaaatacgccagcactcttacctggcagttggattaaagcccgttttccg
gtagatgaacgggagatcacgttaattccacaaagtgccctctacagtgttaacgaactt
tccggcgtgtacctacaacaaggtgataaattcgtgttgcagcaggtaaggctgggggaa
acccgcggtaataatgtggaagtgctggccggattgcaggcgggagatgtgattgccgct
aacgcctatcagatactgcttacccatccagtacagcagtaa
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