Shewanella dokdonensis: KHX94_18375
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Entry
KHX94_18375 CDS
T07469
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sdk
Shewanella dokdonensis
Pathway
sdk01501
beta-Lactam resistance
sdk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KHX94_18375
01503 Cationic antimicrobial peptide (CAMP) resistance
KHX94_18375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdk03036
]
KHX94_18375
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_18375
01504 Antimicrobial resistance genes [BR:
sdk01504
]
KHX94_18375
Chromosome and associated proteins [BR:
sdk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KHX94_18375
Transporters [BR:
sdk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KHX94_18375
Antimicrobial resistance genes [BR:
sdk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KHX94_18375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
RND-MFP_C
Beta-barrel_RND
BSH_CzcB
CzcB_C
HH_MFP_RND
BSH_LcnD
HH_EMRA
Permu_RdRp_thumb
Motif
Other DBs
NCBI-ProteinID:
QVK23049
UniProt:
A0ABX8DE94
LinkDB
All DBs
Position
3830784..3831839
Genome browser
AA seq
351 aa
AA seq
DB search
MKKFLLLPVIAIVFVIAWWLLEHAPQSANVPQQNPPEVVVYTAETQAVRDEVEALGNVIA
NESVVITPKVSDLVTAIYFHDGDMVTAGQLLLQLNDAQQQAQLQQAQVQLAENRRELKRI
RGLVDNRTIAASEQDRLQTLIDSALAQVAAATAAVNDRQIRAPFAGRLGLRQISLGGLVT
PGTVITTLDDIATIKLDFPVPERFIQQLQPGKKVEASAVAYDNTIFHGVVTTIDSRINPE
TRAVTVRAVLSNSDAKLLPGMLMKVRLIKQAREALLLPESAIVPIQQQHQVYVVADNHTA
SRREVTIGLRTRGWVEITSGVTAGEQVIVRGLMKVRDGQPVLLKNAESFSQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattcctgttactacctgttattgccattgttttcgtcattgcttggtggttg
cttgagcatgcgccacaaagcgcgaatgtgccacaacagaatcccccagaagttgtggtc
tataccgctgaaacccaagcggtacgggatgaagttgaagctctcggcaatgtcattgcc
aatgagtcggtagtgatcacccctaaagtcagcgatctggtcacagctatttactttcac
gatggtgatatggtgaccgccggccaactattgttacagctcaacgatgcacagcagcag
gcgcagttacagcaagcgcaggtacagcttgccgagaaccgccgcgagctgaaaagaatt
cgtggattagtcgataaccgtacgattgcggcttctgaacaagatcgtttacaaaccttg
atagacagtgctctggcacaagtcgctgcggccaccgcagctgtaaatgatcggcagatc
cgcgcgccctttgccggacgtttgggattgcggcagatctcgcttggtgggttagtgact
cccggcaccgtcattactaccttagatgacattgccactatcaagctggattttccggtg
ccagaacgctttattcagcaactgcaacccggcaagaaagtcgaagctagcgccgtggct
tacgacaatactatctttcatggtgtggtaacgaccattgacagtcgtatcaatcctgaa
acccgcgcggtcactgttagagccgtattatcaaattctgatgccaaactgcttcccggt
atgttgatgaaagtccgtttgattaagcaagcccgggaggcgctgttgttgcctgaatcg
gcaattgtgccgatccaacaacagcatcaggtctatgttgtggccgataaccacactgcc
agccgtcgtgaagtcaccatcgggctcagaactcgcggttgggtggagattaccagcggc
gtaaccgctggtgagcaagtgatcgtcagagggctgatgaaagtccgtgatggtcagcca
gtgctgctgaaaaatgctgaaagtttcagtcaatag
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